Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2597 |
Symbol | |
ID | 5323465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2694095 |
End bp | 2694994 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791540 |
Product | beta-lactamase-like protein |
Protein accession | YP_001328262 |
Protein GI | 150397795 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.900625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATC CAAGTCGGAA TCCAATGCTC GTAGGCCGCC GTGGCACGCT TAAACTGTTC GCCGCGGCGG CAGTCGCTTC CGGCGCCGGC GCTCTCCTTT CGGAAAAAAC CGCCTTCGGA GCGACGCAGT TCCACCTGAC CCAGGTGCGC AACGCGACGC TACGTGTCGA CTACGCCGGC GTTCGGTTCC TCATCGATCC GATGTTCGCC GGGAAGGGCG CAACCCCCGG CTTCGAAGGA TCGGCAAACA GCAAGCTGAG GAACCCTCTC GTCGACCTGC CTTTGACAGT CGAACAGCTC GCCGATGTAG ATGCAGTTGT CGTGACGCAT CTGCATAGCG ACCATTGGGA CGACGAAGCC GCAGCCATCC TCGATAAGAA GCTACCGCTC TTTGCCCAGA ACGATGAGGA TGCGGCTCAT ATCAGGAGCC AAGGTTTTCA GGATGTCCGC ACCCTCACGG AGAACACCGA GTTCCAAGGA ATCCACCTTG CGAAGACTGG CGGGCAGCAC GGAACAGATG CCACACTGGA AGCCATTCCG GCGCTGGGGC AGGTCTGCGG GGTGGTCTTC AGCCACCCGT CGAACAAGCG GCTGTACCTT GCCGGCGACA CGATCTGGAA CGAGCATGTG GCAGCCGCCA TCTCCCGGCA TCATCCTGAA ATCATCGTGC TCAACGCCGG CAAAGCGGTC TTCCCCGGTT TCCCTCCGAT CATCATGGGA GAGGAAGACG TGTTGGCCGT TCACAAGGCT GCACCGGAAG CTACGTTGAT CGCGAGCCAC ATGGAGGCGG TAAACCACTG TGTCCTCAGC CGCGCCGCGC TACGAGCCTA TTCGGAGGAG CAGGGCTTTG CATCCAGCCT GCTTGTCCCT GCGGATGGGG AAACCCTGGC GTTCAAATGA
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Protein sequence | MTDPSRNPML VGRRGTLKLF AAAAVASGAG ALLSEKTAFG ATQFHLTQVR NATLRVDYAG VRFLIDPMFA GKGATPGFEG SANSKLRNPL VDLPLTVEQL ADVDAVVVTH LHSDHWDDEA AAILDKKLPL FAQNDEDAAH IRSQGFQDVR TLTENTEFQG IHLAKTGGQH GTDATLEAIP ALGQVCGVVF SHPSNKRLYL AGDTIWNEHV AAAISRHHPE IIVLNAGKAV FPGFPPIIMG EEDVLAVHKA APEATLIASH MEAVNHCVLS RAALRAYSEE QGFASSLLVP ADGETLAFK
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