Gene Smed_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2588 
Symbol 
ID5323456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2689795 
End bp2690388 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID640791531 
Producthypothetical protein 
Protein accessionYP_001328253 
Protein GI150397786 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.248563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGGC TGACGATGAT GCGAATTTTG CGCTCGAGCG AGTACAGGCA TATGCCCTGG 
AAGAACGGCG GCGGGGAGAC GGTGGAAATC GCCGTTTCCC CGGATCGCGC CACGATTGCC
GATTTCGACT GGCGCATAAG CATGGCGACC GTCGCCACCA ACGGTTCCTT CTCAACCTTC
CCCGGCGTCG ATCGCACGCT CTCGATCCTC GAGGGCGGCG GGATGACGCT TTCGATCGAA
GGCCGGCAGC CGAAGCTGCT CACTGCCTCG GACGCCCCCC TCAGCTTTCC GGCCGATGTG
CCGACATCGG CGGCGCTTTC GGATGGCCCG GTCACTGACC TCAATGTGAT GACGCGGCGC
CAGGCGTTGA AACATCGCAT GCGCAGAATT CATGTCGAGG GCGCGCATCC GGTTGCCACG
AACGCCCGCG ACCTTGTTCT TTTCTGCCAC CGTGGCAGCG TTGCGCTCGT GACCGGAGGC
GTCTCGGCAA CCCTGCATGG GCTGGACACG GCGATCCTTG TCCAGCCTGC CAGCCTCACG
CTCACGGCCG ACATCGCTTC GGAAGCTTTT CTGATAGAGA TCGGCCCGGC CTGA
 
Protein sequence
MARLTMMRIL RSSEYRHMPW KNGGGETVEI AVSPDRATIA DFDWRISMAT VATNGSFSTF 
PGVDRTLSIL EGGGMTLSIE GRQPKLLTAS DAPLSFPADV PTSAALSDGP VTDLNVMTRR
QALKHRMRRI HVEGAHPVAT NARDLVLFCH RGSVALVTGG VSATLHGLDT AILVQPASLT
LTADIASEAF LIEIGPA