Gene Smed_2574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2574 
Symbol 
ID5323442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2671333 
End bp2671797 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content61% 
IMG OID640791517 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001328239 
Protein GI150397772 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0518335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.327443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGA TCGACAAGAC GGACCGGAGA ATCCTCAATA TCCTGCAGGC GGACGGGCGG 
ATTACCAATC TGGAACTCGC CGACCGGATC GGGCTTTCCC CGACCGCGAC CAGCGAACGC
CTGAGGCGGC TCCTGAAAGA GGGCTATGTT TCCGGCTTCG GCGCACGCCT CGATCCGCAC
AAGCTCGGCT TCGGGCTGCT GGTCTTCATC GAGGTGATGC TCGACAAGAC GACGCCGGAG
GTCTTCGACC AGTTCGCGGC CGCCATAAAG CAGGCGCCCG CGGTGCTCGA ATGCCACATG
GTGGCGGGAG GCTTCGATTA TCTCGTCAAG ACGCGCTTCG AGGACATGGC CGCCTATCGT
AATTTTCTCG GCCAGGTGCT GTGGACACTC CCGGGCGTCA AGGAGACGCG AACCTATGCG
GTCATGGAGG AAATCAAGAA TGACGGGCCG CTGCCGTTGC TTTGA
 
Protein sequence
MHQIDKTDRR ILNILQADGR ITNLELADRI GLSPTATSER LRRLLKEGYV SGFGARLDPH 
KLGFGLLVFI EVMLDKTTPE VFDQFAAAIK QAPAVLECHM VAGGFDYLVK TRFEDMAAYR
NFLGQVLWTL PGVKETRTYA VMEEIKNDGP LPLL