Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2574 |
Symbol | |
ID | 5323442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2671333 |
End bp | 2671797 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791517 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001328239 |
Protein GI | 150397772 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0518335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.327443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACCAGA TCGACAAGAC GGACCGGAGA ATCCTCAATA TCCTGCAGGC GGACGGGCGG ATTACCAATC TGGAACTCGC CGACCGGATC GGGCTTTCCC CGACCGCGAC CAGCGAACGC CTGAGGCGGC TCCTGAAAGA GGGCTATGTT TCCGGCTTCG GCGCACGCCT CGATCCGCAC AAGCTCGGCT TCGGGCTGCT GGTCTTCATC GAGGTGATGC TCGACAAGAC GACGCCGGAG GTCTTCGACC AGTTCGCGGC CGCCATAAAG CAGGCGCCCG CGGTGCTCGA ATGCCACATG GTGGCGGGAG GCTTCGATTA TCTCGTCAAG ACGCGCTTCG AGGACATGGC CGCCTATCGT AATTTTCTCG GCCAGGTGCT GTGGACACTC CCGGGCGTCA AGGAGACGCG AACCTATGCG GTCATGGAGG AAATCAAGAA TGACGGGCCG CTGCCGTTGC TTTGA
|
Protein sequence | MHQIDKTDRR ILNILQADGR ITNLELADRI GLSPTATSER LRRLLKEGYV SGFGARLDPH KLGFGLLVFI EVMLDKTTPE VFDQFAAAIK QAPAVLECHM VAGGFDYLVK TRFEDMAAYR NFLGQVLWTL PGVKETRTYA VMEEIKNDGP LPLL
|
| |