| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2563 |
|---|
| Symbol | |
|---|
| ID | 5323431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2660206 |
|---|
| End bp | 2661510 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640791506 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001328228 |
|---|
| Protein GI | 150397761 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.645388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG TTATCCTTGC CTTTCTGGCC GACTACTGGC TGTCGCTGCT TTCCGTTATC
TGCCTTCTCG TCATTTCGGC GTTTTTTTCC GGTTCGGAGA CCGCACTGAC CGCGGCTTCG
CGCTCGCGCA TGCACACGCT GGAAAACAAC GGTGACGAGC GTGCCGGTAT CGTCAACAAT
TTGATCGAGC GGCGCGACCG TCTGATCGGG ACGCTGCTCA TCGGCAATAA TCTCGTCAAC
ATTCTCGCTT CGTCGTTGAC GACGAGCCTT CTGATCGGCC TCTTCGGCGA TTCCGGCGTG
GCGATCGCCA CCGTCGCCAT GACGGTCCTG CTCGTCATCT TCTCCGAGGT GCTGCCAAAA
AGCTGGGCGA TCGCATCGCC GGATCGGTTC GCGCTGGCGG TTGCGCCTCT GGTCCGTCCC
TTCGTTGTCG TCGTCGGACC GATATCCTCC CTCGTCAACG CGATCGTTCG CCGCATCCTG
CACCTCTTCG GCGTCAACCT TTCATCCGAC CTGCCGATGC TGTCGGCGCA TGAAGAACTG
CGCGGTGCCG TCAACCTGCT TCATCGGGAG GGATCGGTCA TCAAGGCGGA CCGCGACCGG
CTGGGCGGAG TGCTCGATCT CGGCGAACTC GAGGTTTCCG ACATCATGAT CCATCGCACC
TCCATGCGGG CGATCAACGC GGATGATCCG CCCGAGACCT GCGTGCGCGA AATCCTCGAA
AGTCCGTTTA CGCGCCTGCC ATTGTGGCGC GGATCCGCCG ACAACATCAT CGGCGTCGTC
CATTCCAAAG ATCTGCTCCG GGCGCTGGCC GAACCGAATG TGGAACCTGA GACGCTCGAT
ATCGTCAAGA TCGCGCAAAA GCCGTGGTTC GTTCCGGACT CGACCAATCT CAAGGACCAG
CTCAATGCGT TCCTTCGCCG CAAGCTGCAT CTTGCCATCG TCGTCGACGA ATATGGTCAG
GTGCAGGGGC TTGTCACGCT GGAGGATATT CTCGAGGAGA TTGTCGGCGA CATTGCCGAC
GAGCACGACA TCGACATTCA AGGCGTGCGT CAGGAAGCCG ACGGATCGAT CGTGGTCGAT
GGTTCCGTGC CGATCCGCGA TCTCAATCGC GCGCTCGATT GGTCATTGCC GGACGAAGAG
GCGACGACGG TTGCCGGCCT CGTGATCCAT GAATCCAAGA GCATTCCGGA AGAGCGGCAG
GCTTTCACGT TCTACGGCAA GCGCTTCACC GTGATGAAGC GGGTTAAAAA CCGGATCACC
AAATTGCGAA TCCGCGCCGC CGAGGACGAG GGGCAGGTCG GTTAG
|
|---|
| Protein sequence | MTDVILAFLA DYWLSLLSVI CLLVISAFFS GSETALTAAS RSRMHTLENN GDERAGIVNN
LIERRDRLIG TLLIGNNLVN ILASSLTTSL LIGLFGDSGV AIATVAMTVL LVIFSEVLPK
SWAIASPDRF ALAVAPLVRP FVVVVGPISS LVNAIVRRIL HLFGVNLSSD LPMLSAHEEL
RGAVNLLHRE GSVIKADRDR LGGVLDLGEL EVSDIMIHRT SMRAINADDP PETCVREILE
SPFTRLPLWR GSADNIIGVV HSKDLLRALA EPNVEPETLD IVKIAQKPWF VPDSTNLKDQ
LNAFLRRKLH LAIVVDEYGQ VQGLVTLEDI LEEIVGDIAD EHDIDIQGVR QEADGSIVVD
GSVPIRDLNR ALDWSLPDEE ATTVAGLVIH ESKSIPEERQ AFTFYGKRFT VMKRVKNRIT
KLRIRAAEDE GQVG
|
|---|
| |