Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2547 |
Symbol | |
ID | 5323415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2645393 |
End bp | 2645962 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791490 |
Product | ChaC family protein |
Protein accession | YP_001328212 |
Protein GI | 150397745 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3703] Uncharacterized protein involved in cation transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTGG ATATGGACGA ATTTTGGGTC TTTGGCTACG GGTCGCTGAT GTGGAATCCG GGCTTTCGCT TCGAGGAGAA GCTGACGGCG CGCGCGTTCG GTTATCGCCG CTCCCTGTGT GTGCGCTCCT GGGTTCACCG CGGCACGGAA CTGCGCCCGG GGCTGGTACT CGGGCTCGAT TATGGGGGCT CCTGCGTCGG AACGGCTTTC CGCGTCGAGT CCGCGCAGAA GACTGGCGTC ATCGATTATC TGCGCGAACG CGAACTGGTC ACCCATGTTT ACAAGGAAAG AACCATGCCG GTGCTACTTT CCGACGGACG GCGCGTCCCT GCGCTGACCT ATGTGATCGA TCGCAGCCAC GCTCAATATG CCGGCGCGCT TCGCGCAGAG GAGGCGGCTG CGGCGGTTGC CGTGGCCATC GGCAAATCCG GCCCGAACAG CGAATATGTT CTCAACACGC TCCAGCATCT CCGCGAAATG GGCATTCGTG ACCACTGGCT GGAGGAGGTT GCCGCGAGGT TGGCGGCTAG CGAAGCACCG CCCGACCGAA GCCTGCACGC GGGCGGGTGA
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Protein sequence | MAVDMDEFWV FGYGSLMWNP GFRFEEKLTA RAFGYRRSLC VRSWVHRGTE LRPGLVLGLD YGGSCVGTAF RVESAQKTGV IDYLRERELV THVYKERTMP VLLSDGRRVP ALTYVIDRSH AQYAGALRAE EAAAAVAVAI GKSGPNSEYV LNTLQHLREM GIRDHWLEEV AARLAASEAP PDRSLHAGG
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