Gene Smed_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2547 
Symbol 
ID5323415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2645393 
End bp2645962 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content63% 
IMG OID640791490 
ProductChaC family protein 
Protein accessionYP_001328212 
Protein GI150397745 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3703] Uncharacterized protein involved in cation transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTGG ATATGGACGA ATTTTGGGTC TTTGGCTACG GGTCGCTGAT GTGGAATCCG 
GGCTTTCGCT TCGAGGAGAA GCTGACGGCG CGCGCGTTCG GTTATCGCCG CTCCCTGTGT
GTGCGCTCCT GGGTTCACCG CGGCACGGAA CTGCGCCCGG GGCTGGTACT CGGGCTCGAT
TATGGGGGCT CCTGCGTCGG AACGGCTTTC CGCGTCGAGT CCGCGCAGAA GACTGGCGTC
ATCGATTATC TGCGCGAACG CGAACTGGTC ACCCATGTTT ACAAGGAAAG AACCATGCCG
GTGCTACTTT CCGACGGACG GCGCGTCCCT GCGCTGACCT ATGTGATCGA TCGCAGCCAC
GCTCAATATG CCGGCGCGCT TCGCGCAGAG GAGGCGGCTG CGGCGGTTGC CGTGGCCATC
GGCAAATCCG GCCCGAACAG CGAATATGTT CTCAACACGC TCCAGCATCT CCGCGAAATG
GGCATTCGTG ACCACTGGCT GGAGGAGGTT GCCGCGAGGT TGGCGGCTAG CGAAGCACCG
CCCGACCGAA GCCTGCACGC GGGCGGGTGA
 
Protein sequence
MAVDMDEFWV FGYGSLMWNP GFRFEEKLTA RAFGYRRSLC VRSWVHRGTE LRPGLVLGLD 
YGGSCVGTAF RVESAQKTGV IDYLRERELV THVYKERTMP VLLSDGRRVP ALTYVIDRSH
AQYAGALRAE EAAAAVAVAI GKSGPNSEYV LNTLQHLREM GIRDHWLEEV AARLAASEAP
PDRSLHAGG