Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2541 |
Symbol | |
ID | 5323409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2640280 |
End bp | 2640825 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640791484 |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_001328206 |
Protein GI | 150397739 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGTCG TCCGTGGCAA GAATATCGAA GTCCTCTACA GTGCCGAAAC CATTGCAGCG CGGAACCAGG AATTGGCCGC CGATATCGTT CGCGGGCCGC ACAAGGACCT TCTGGTTATC TCGATCCTCA AGGGGTCTTT CATCTTTGCG GCGGATCTGA TTCGCGCCAT GCACGCTGCA GGCCTTGCGC CGGAGGTCGA ATTCATCACG CTTTCGAGCT ACGGAACCGG GACCGAATCC AAGGGCGTCA AGATCACCAA GGATATAGAC AGCGATGTGC GAGACCGGGA CGTACTTCTC ATCGACGACA TTTTGGAGTC CGGCCGGACC TTGCGCTTCG CCAAGGAACT CCTCCTTGAG CGCGGCGCCC GCAACGTCAC CATCGCGGTC CTGCTCGACA AGCGGGTGAA ACGCCGCGTC GATCTCGAAG CGGATTATGT CGGCTTCGAA TGCCCGGACC ATTTCGTCGT CGGTTACGGC ATGGATGTCG CTTATGCATT CCGGGAGCTG CCGTTCGTCG GAGTGGTGAC GGGTGACGCA AAATAA
|
Protein sequence | MPVVRGKNIE VLYSAETIAA RNQELAADIV RGPHKDLLVI SILKGSFIFA ADLIRAMHAA GLAPEVEFIT LSSYGTGTES KGVKITKDID SDVRDRDVLL IDDILESGRT LRFAKELLLE RGARNVTIAV LLDKRVKRRV DLEADYVGFE CPDHFVVGYG MDVAYAFREL PFVGVVTGDA K
|
| |