| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2531 |
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| Symbol | |
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| ID | 5323399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2629037 |
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| End bp | 2629828 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791474 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001328196 |
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| Protein GI | 150397729 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.751924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATAC CGCTGCATGA TAGAAACGAG CTGAAGCACA TCAGAATGCA ATATGTGACG
ATCGCGCTGA TCCTCACCAA CATCGTCGTC TGGCTCGTCA CGGTGCCGGT GGCGAGCGAG
GAATTCGCCA ATGCGGCGAT CCTCGGGCTC GGCTACATTC CTGCGATCAT CTTCGATTAT
GCCGATCTCG ACCCGTCGCT GGTGATCGTC CCCGATGGGT TCACCTTCCT CACCTATTCG
TTTCTGCATG GCGATCTTTC GCATCTTGCC ATGAACATGC TTTTCCTTTG GGTTTTCGGC
GACAATGTAG AGGACGCGCT CGGGCACTTC CGTTTCCTTG TCTTCTACCT CCTGTGTGCT
GCCGCCGGAG CATTTGCGCA CGGGCTGCTC GACCTCGCCT CCGAAGCGCC GCTGATTGGC
GCCTCCGGCG CGATATCGGG CGTCGTGGCC GCCTATTTTC TCCTGCACCC GAAGGTGCGG
GTCTGGGTGC TCGTGCTCTT CCGGATCCCC TTACCCCTTC CCGCAGCCAT TCCGCTCGCC
TTCTGGATCG GCCAGCAGTT TTTCATGTTG GTGGCAGATA CCGACAGCGG CGTTTCCTGG
AGTGCGCATG TCGGCGGCAT CGTCGCGGGT CTTCTGCTCG TTGTCATTTT GCGACGCCGC
GGTGTGCCCC TGTTCGACCG GACGATCGTT ACGCCGCGGG CAGTGGAGCA CCGGACAAAG
GCGCCCGAAG AGGTGCTGAC CCCGGCATCA GGAGTTTCGA GGCCTGCCCC GCATTGGGGC
CGCCCGAGCT GA
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| Protein sequence | MFIPLHDRNE LKHIRMQYVT IALILTNIVV WLVTVPVASE EFANAAILGL GYIPAIIFDY
ADLDPSLVIV PDGFTFLTYS FLHGDLSHLA MNMLFLWVFG DNVEDALGHF RFLVFYLLCA
AAGAFAHGLL DLASEAPLIG ASGAISGVVA AYFLLHPKVR VWVLVLFRIP LPLPAAIPLA
FWIGQQFFML VADTDSGVSW SAHVGGIVAG LLLVVILRRR GVPLFDRTIV TPRAVEHRTK
APEEVLTPAS GVSRPAPHWG RPS
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