| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2520 |
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| Symbol | |
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| ID | 5323387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2618009 |
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| End bp | 2619433 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791462 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001328185 |
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| Protein GI | 150397718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.889784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAT GTCAATCGGC CGGACGAATG CTGCCGCCGG CGCTGAGATA TCGCCTTTCT
CTTGTTGCGC GGGGGCTCAC GCCGCTTCTT GCGGGTGCCG ATCAGAGGCG CAGCGCCCAG
CGCGTTGCGC TCATCGCCTT TCTGATCCGT GTCGTCAGCG CGGCAATCGC TTTCCTTTCA
CAAATCGTTC TGGCGCGGTT CGTCGGCGAA TTCGAATACG GCATCTTCAT TTTCGTCTGG
GTACTGGTCG TCCTCTTCGG GAACCTGTCC TGCCTCGGCT TCCATGCGAC CGTGATCCGC
TTCCTGCCGG AATATCATAC GACCGCAGCA CTTGCGAACA TCCGCGGCCT GACGACCACG
GCACGCGTCT TCGCGATGAT TTCGGCAACC ATGCTCGCCG CTGCCGGGAT GACCGGCCTC
TGGGCCTTCG GGTCAGCTAT CGAAAGCTAC TATGTGATCC CGCTCTATAT CGGCCTGTTC
ACCCTGCCGA TGATCGCGCT CGGCGACGTC CTGGACGGCA CCGCACGGGC GCATAGCTGG
CCGGTCGCGG CGATGAGCCC GACCTATCTC GTACGTCCGA TGCTGATTCT CGGTTTCATG
ATCATCGCGG TCCGGGCCGG GCTCCCCCGT GATGCGACGA CGGCCATGGG CGCTGCACTG
GCGGCGACCT ATGTCACCAC GTTCGGACAG TTTCTTGCGA TGGCATGGCG ACTCCATCGG
CACTACACGC GCGGACCGAT GAAGATCGAG CTAGGGCGGT GGCTGCGCGT TTCCGTTCCG
ATCTTTCTGG TCGACGGTTT CGGTTTCCTG CTGACCAATT CCGACGTCGT CATCGTGGGT
CTTTACCTGA AGCCGGACGA TGTGGCGGTC TATTTCGCGG CGGCCAAGAC AATGGCACTC
GTTCATTTCG TCATGTTCGC TGTCAAGGCA GCGGCAGGTC CGCGGTTTGC CGCGGCCATG
GCTGCCGGCG ACCGCCGGCA GTTGGCGGAA ATCGCCGTGG AAAGCGCGCG CTGGTGCTTC
TGGCCTTCGC TTGTCATCGG CGGCTGCGTG CTGGCAGCAG GCAACATGCT GCTTTCGCTG
TTCGGCCCGG CCTTTACATC GGGTGCGCCC TTGATGGCCA TTCTGCTGAC GGGAATTCTT
GCCAAGGCCT TCGTCGGACC CGCCGAAACA CTGCTCACGA TGGCAGGGCG GCAAAAGCTT
TGCGCCGTCC TTTATGCCGC CGCGCTCGGG GCAAACATCG CCTTGAACCT GACGCTCATT
CCGGCCTTCG GCCTGACGGG CGCAGCCGCC GCGACTGCAG GCGCGATGTT CGTGGAGGCA
GCCATCCTGC ATTTCGCCGT CAGGCGCATC TTCGGCTTCT CCCTGCTGGC CGTTGCCGCC
GCGGCGGGCA TGAACAACAA CGAGAACGAG GCGATTGAGC CATGA
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| Protein sequence | MAVCQSAGRM LPPALRYRLS LVARGLTPLL AGADQRRSAQ RVALIAFLIR VVSAAIAFLS
QIVLARFVGE FEYGIFIFVW VLVVLFGNLS CLGFHATVIR FLPEYHTTAA LANIRGLTTT
ARVFAMISAT MLAAAGMTGL WAFGSAIESY YVIPLYIGLF TLPMIALGDV LDGTARAHSW
PVAAMSPTYL VRPMLILGFM IIAVRAGLPR DATTAMGAAL AATYVTTFGQ FLAMAWRLHR
HYTRGPMKIE LGRWLRVSVP IFLVDGFGFL LTNSDVVIVG LYLKPDDVAV YFAAAKTMAL
VHFVMFAVKA AAGPRFAAAM AAGDRRQLAE IAVESARWCF WPSLVIGGCV LAAGNMLLSL
FGPAFTSGAP LMAILLTGIL AKAFVGPAET LLTMAGRQKL CAVLYAAALG ANIALNLTLI
PAFGLTGAAA ATAGAMFVEA AILHFAVRRI FGFSLLAVAA AAGMNNNENE AIEP
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