Gene Smed_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2514 
Symbol 
ID5323381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2609970 
End bp2610377 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content64% 
IMG OID640791456 
ProductNUDIX hydrolase 
Protein accessionYP_001328179 
Protein GI150397712 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.348957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATA GGAACATCGT GCTCGTCGCC GCTTGCGCGC TCGTCGATTC CGACGGACGT 
GTTCTGTTGG CGCAGCGCCC GCAGGGCAAG CCTCTCGCCG GCCTCTGGGA GTTCCCGGGC
GGTAAAGTCG AGAGTGGCGA GACACCCGAA GAGACGCTGA TCCGCGAACT CGAAGAGGAG
CTCGGGATCC GCACCAAGGT CGCGTGCCTC GCGCCGCTCA CATTCGCGAG CCACGGCTAT
GACGAATTTC ACCTGCTGAT GCCGCTCTAC GTCTGCCGCC GCTACGAGGG TTTCGCCGAA
GGCCGCGAAG GCCAGGCCAT CAAATGGGTG CGGCCCAAAG CGCTGCGCGA CTATCCGATG
CCGCCCGCCG ACGAACCATT GATCCCGTTC CTGATGGACC TGCTTTAG
 
Protein sequence
MQDRNIVLVA ACALVDSDGR VLLAQRPQGK PLAGLWEFPG GKVESGETPE ETLIRELEEE 
LGIRTKVACL APLTFASHGY DEFHLLMPLY VCRRYEGFAE GREGQAIKWV RPKALRDYPM
PPADEPLIPF LMDLL