Gene Smed_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2508 
Symbol 
ID5323375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2605857 
End bp2606714 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content64% 
IMG OID640791450 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001328173 
Protein GI150397706 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0186466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.28027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTCA AGGCCGCCGC CGTCCAGATG TGCTCGGGGG TCGACCCCGC AAGGAATGCC 
GAGACGATGG CGGAGCTGGT GCGCGAAGCG GCATTGCGAG GGGCAGGCTA TGTCCAGACG
CCGGAGATGA CCGGAGCGAT CCAGCGCGAC CGGTCAGGCC TGCGGAGCAT ATTGCGGGAC
GAGGCGAACG ATATCGTCGT TCGGAAGGCT GCCCGCCTTG CCGGCGAACT CGCCATCTAT
CTGCATGTGG GCTCGACGCC GATCGCGCTC GCCGACGGCA AGATTGCCAA TCGCGGCTTC
CTGTTCGGGC CCGATGGCGC TAAGATCTGT GAATACGACA AGATCCACAT GTTCGACGTG
GACCTTGAGA ATGGCGAGAG CTGGCGCGAA AGCGCCGCCT ATCATCCCGG TGCGACCGCC
CGTATCGCAG ATCTGCCGTT CGGCAAGCTG GGTTTTTCGA TCTGCTACGA TGTCCGCTTC
CCCGAACTTT TCCGACAGCA GGCGGTGGCC GGGGCCGAGA TCATGTCGGT GCCCGCGGCG
TTTACACGCC AGACCGGCGA GGCGCATTGG GAGATACTCC TGCGGGCTCG CGCAATTGAA
AACGGGCTCT TCGTCGTTGC CGCGGCTCAG GGAGGCACGC ATGAGGACGG GCGGGAGACC
TTCGGCCACT CGATGATCAT CGATCCGTGG GGCAGGGTGC TTGCTCAAGC CGGTCGGACC
GGCGAGGAGA TCATCATCGC AGAGATCGAT CCATTGGCGG TGCACACGGC CCGCGCTAAG
ATCCCCAACC TCAAGAACGC GCGCAGCTTC GTTCTGGATG AGGTGGTCCC GGCCGGAAAA
GGAGGCGCTG CAGCTTGA
 
Protein sequence
MMFKAAAVQM CSGVDPARNA ETMAELVREA ALRGAGYVQT PEMTGAIQRD RSGLRSILRD 
EANDIVVRKA ARLAGELAIY LHVGSTPIAL ADGKIANRGF LFGPDGAKIC EYDKIHMFDV
DLENGESWRE SAAYHPGATA RIADLPFGKL GFSICYDVRF PELFRQQAVA GAEIMSVPAA
FTRQTGEAHW EILLRARAIE NGLFVVAAAQ GGTHEDGRET FGHSMIIDPW GRVLAQAGRT
GEEIIIAEID PLAVHTARAK IPNLKNARSF VLDEVVPAGK GGAAA