| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2491 |
|---|
| Symbol | |
|---|
| ID | 5323352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2575326 |
|---|
| End bp | 2576276 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640791428 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001328157 |
|---|
| Protein GI | 150397690 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.655345 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA ATCTCATATT TGGATTCTTC ATGCGCTTTG TTGTGTTGGC TTTACTAGGC
ATCATGCTGT CTTCTCCTGT TTTCGCTCAA TGTGACGGTA GGCTTATCGC CGAAGGGGCG
TTCCTCCACC CACCGCTGTG CGCTCCCAAG GAGCCGAAAC GGATCATATC TCTAGTCCCG
ACGTTCAGTC TTGGCATAGC GTTGGAGCTT GGCCTACCTG TCGTTGGCGC TCCGCTTTTC
GGGATGAGCG ATGAGGATCT GAAGTCGAAA GCTGAGGCGG CGGGTGTGGT GGATCTCGGT
TCTTTCTTGG AGCCCAGCAT CGAGAAGATC GTCGCGCTTC AGCCCGATCT CATCATCGGC
AGCAGCTTCC TGGGCGAGGA AGCATACCAG ATGGCATCGC GATTGGCTCC CACCGCGCTG
CTCACCGGAG CGAACTGGAA AGAATTCTAT CGGACGCTGG CAAATATCGC TGGCGTCGAC
GATGGAATTG AAGGTCGCTT CGCTGAATAC GAGAAGCGGG TTGCGGCAGT TCGCGAGCGG
GTTCCCAAGG ATTTGCGAGT ATCGGTGGTC CGCATCACGC CCTGGGAATT CCAGGTCTTT
CTCGATGAAC CCAATGCATG GGCGCCGTTC GACGTGCTGC GCAAGGCGGG TGTCAGGCGT
ACAGATTTCG AGACATCCGA AACGAATGTC GGAACGAAAC GCATCGATTT CGAGGGACTG
GCCGGCCTGG ATGGGGATAT CCTGCTCTAC ATCGTCGGCG GTTCCAACGA TTCAGCCACC
AGCGGCAGGC ATGAGGCCGT GCTGACGAAC CCATTGTGGA AAATGCTGCC GGCCGTCAAA
GCGGGCCGCG TTTATCGAGT AGACGCAGGC ACCTGGATAG AGTTCAACGG TCTGGCGTCG
GCCAATAAGA TTCTCGATGA CATCGAGACT TACATCATCC CGAGGCCGTG A
|
|---|
| Protein sequence | MNENLIFGFF MRFVVLALLG IMLSSPVFAQ CDGRLIAEGA FLHPPLCAPK EPKRIISLVP
TFSLGIALEL GLPVVGAPLF GMSDEDLKSK AEAAGVVDLG SFLEPSIEKI VALQPDLIIG
SSFLGEEAYQ MASRLAPTAL LTGANWKEFY RTLANIAGVD DGIEGRFAEY EKRVAAVRER
VPKDLRVSVV RITPWEFQVF LDEPNAWAPF DVLRKAGVRR TDFETSETNV GTKRIDFEGL
AGLDGDILLY IVGGSNDSAT SGRHEAVLTN PLWKMLPAVK AGRVYRVDAG TWIEFNGLAS
ANKILDDIET YIIPRP
|
|---|
| |