| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2472 |
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| Symbol | |
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| ID | 5323333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2553948 |
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| End bp | 2554706 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791410 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001328139 |
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| Protein GI | 150397672 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.117337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGA TCATCGATAC GTTTCGTCCA GACCTGTTTG CCGGCAGGGA TATTCTGATT
ACCGGCGGTT CGTCCGGCAT CGGCCTTGCC ATCGCGCAGG GTTTTGCCCG GCTCGGCGGC
ACGGTCATCG CGCTGGGCAG CTCTGAATCC AAGCTCAAGG CCGCCGCGGC CGATCCGGAA
AACAAGGGCA TCCGCTTCGA GCGCGTCGAC GTGCGCGATC CGGAAATGAT CAACGCATTC
GCCAAGACTC TCGGCAAGCT CGACGTTCTC ATCAACGGCG CAGGCATCGC CCGGCCCGAG
GCGGAATTCG AGGACGCGAC CTACATGGAG GTGATGGACG TCAACCTGAA CAGCCAGATG
CGCTTCGCCA TGGCCGTCCT GCCGCTCCTG AAAGCCTCGC GCGGCGTCAT CCTCAACACC
GCCTCCATGC TGAGCTATGT CAGCGATCCG CTCGTGCCGG CCTATGGCGC CAGCAAATCG
GGCGTGCTCG GCCTCACTCG CCATCTCGCC CACGCCTTCG GCCCGGATGG CATCCGCGTC
AACGCCATCT CTCCCGGCTA TCACAAGACG GACATGACCA GGGGTCTGTG GACCGACCCG
GTGCCGGCCG AGAAAATCGC CCAGCGTTCA GCGCTCAAGC GCTGGGGTAC GGTGGATGAC
CTTGTTGGAA CCGCGCTCTT CCTGGCCTCG CCGGCCGCGG AATTCATTAC CGGCGCCGAC
CTGCCGGTCG ATGGCGGTTT CGTGGTCGGC AGCTTCTGA
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| Protein sequence | MKEIIDTFRP DLFAGRDILI TGGSSGIGLA IAQGFARLGG TVIALGSSES KLKAAAADPE
NKGIRFERVD VRDPEMINAF AKTLGKLDVL INGAGIARPE AEFEDATYME VMDVNLNSQM
RFAMAVLPLL KASRGVILNT ASMLSYVSDP LVPAYGASKS GVLGLTRHLA HAFGPDGIRV
NAISPGYHKT DMTRGLWTDP VPAEKIAQRS ALKRWGTVDD LVGTALFLAS PAAEFITGAD
LPVDGGFVVG SF
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