Gene Smed_2461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2461 
Symbol 
ID5323322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2543501 
End bp2544229 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID640791399 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001328128 
Protein GI150397661 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.162516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA GAAAGCCGCT CGTCATGATC ACCGGCGCAA GCGCCGGTAT CGGGCAGGAG 
ACTGCGCGCG TCTTTTCGGC CGCGGGCTAT CCCCTGCTCC TGATTGCCCG GCGGCCCGAA
CTGATCGAGG CGATGGGACT CCAGAACGCG CTGGCGGTCG CAGCCGACGT CCGTGACTAT
GATGCGCTCG CGGGGGCGAT CAGGCAGGGT GAGGCACGGT TCGGCCCCGT CGACTGCCTC
ATCAACAATG CCGGCATTTC CCGTCTCGCG CGGCTCGACG AACAGGATCC CGCGCAATGG
CGCGATCTCG TGGACATCAA CTGCCTCGGC GTTCTCAACG GCATGCATGC GGTCGCTCCA
GGCATGAAGG AGCGCCGCCA CGGCACTATC ATCAACGTTT CCTCGATCGC CGGCCGCAAG
GTCTATCCGC ACCATGACGT CTATGGCGGC ACGAAGCATT TCGTTCATGC CGTCAGCGAA
GGCATGCGCC AGACCATGTC GGCCTATCGA GTTCGCGTCA TGGTTATCTC GCCCGGGGTT
GCGAAGTCTG AAATCGACAA GACCATCACC CACCAGAACG CTTACGACTT CTGGGACGGC
GGCCGCAAGC TGCTGGATGG AGGGCTCGAC GCCAACGACA TCGCGCGGAC CATGCTCTTC
GCCTATCAGC TGCCGCAGAA CGTCAATCTC CAGGAAATGA CGATCACCCA TACAGGCCAG
GAATTCTGA
 
Protein sequence
MADRKPLVMI TGASAGIGQE TARVFSAAGY PLLLIARRPE LIEAMGLQNA LAVAADVRDY 
DALAGAIRQG EARFGPVDCL INNAGISRLA RLDEQDPAQW RDLVDINCLG VLNGMHAVAP
GMKERRHGTI INVSSIAGRK VYPHHDVYGG TKHFVHAVSE GMRQTMSAYR VRVMVISPGV
AKSEIDKTIT HQNAYDFWDG GRKLLDGGLD ANDIARTMLF AYQLPQNVNL QEMTITHTGQ
EF