Gene Smed_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2460 
SymbolgldA 
ID5323321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2542389 
End bp2543483 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content65% 
IMG OID640791398 
Productglycerol dehydrogenase 
Protein accessionYP_001328127 
Protein GI150397660 
COG category[C] Energy production and conversion 
COG ID[COG0371] Glycerol dehydrogenase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGG CATTCGGCGG TCCAAACAAA TACATTCAGC GCGCAGGCGA GATCGACAAG 
CTGGCGGACT ATCTGGCACC GCTCGGCAAG CGCGCGCTCG TGCTGATCGA CCGCGTGCTG
TTCGAAAAGC TCAGTGAACG TATTGCCAAA AACTGCGACG ACAAGCTCGA CCTCCACTTC
GAGCGGTTCG GCGGCGAATG CTGCACCTCG GAGATCGAGC GTGTGCGCGC GGCCGCAGCC
GAGCACCGCA GCGATATCCT CGTGGGTGTG GGCGGCGGCA AGACCGCCGA CACCGCCAAG
ATCGTCGCCA TCGACACGGA TGCGCGCATC GTCATCGCAC CGACCATCGC CTCCACCGAT
GCGCCCTGCA GCGCGATTGC GGTGCGCTAT TCCGAGCATG GCGTCTATGA GGAATCGCTC
CGCCTGCCCC GCAACCCGGA CGTGGTCGTC GTCGACTCCG CGCTGGTGGC AGCCGCGCCT
GCACGCTTCC TGGTCGCCGG TATCGGCGAT GCGCTTTCGA CCTGGTTCGA GGCCCGCTCC
AATATAGAGT CACGCACAGA CAACTATGTC GCTGGCGGGT TTCCGGCAAC CGAGGCCGGC
ATGGCTATCG CGCGGCATTG CCAGGAGGTG CTGATGCGCG ACGCCGTAAA GGCCAAGGTC
GCCGTCGAGG CCGGTCTGCT CACCCGCGCT GTGGAGAATA TCATCGAGGC GAACACGCTG
CTGTCGGGCC TCGGCTTCGA GAATTGCGGC TGCTCGGCGG CGCACGGCAT CCATGACGGC
TTGACCGTGC TCGAAGAGGT CCATGGTTTA TTCCACGGCG AGAAGGTCGC TTTCGGCACG
CTCTGCCTGC TGATGCTGGA AAACCGCGAC CGGGGCGAAA TCGAGGCGAT GATACGCTTC
TGCCGCAGCG TGGGTCTGCC GACCAGACTG GCGGACCTAG GCATCGTGGA TGACGTGCCC
GCCAAGATCG GGCGCGTGGC GGATGCCGCC TGCCGGCCCG GCAACATCAT CTATGCCACG
CCGGTTGCCG TCACCGCTCC CGCGGTGCGC GACGCGATCC TGGCGCTCGA TGCGCTGTCG
CGCAGCATCG ATTGA
 
Protein sequence
MARAFGGPNK YIQRAGEIDK LADYLAPLGK RALVLIDRVL FEKLSERIAK NCDDKLDLHF 
ERFGGECCTS EIERVRAAAA EHRSDILVGV GGGKTADTAK IVAIDTDARI VIAPTIASTD
APCSAIAVRY SEHGVYEESL RLPRNPDVVV VDSALVAAAP ARFLVAGIGD ALSTWFEARS
NIESRTDNYV AGGFPATEAG MAIARHCQEV LMRDAVKAKV AVEAGLLTRA VENIIEANTL
LSGLGFENCG CSAAHGIHDG LTVLEEVHGL FHGEKVAFGT LCLLMLENRD RGEIEAMIRF
CRSVGLPTRL ADLGIVDDVP AKIGRVADAA CRPGNIIYAT PVAVTAPAVR DAILALDALS
RSID