| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2445 |
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| Symbol | |
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| ID | 5323306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2527415 |
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| End bp | 2528188 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791383 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001328112 |
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| Protein GI | 150397645 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCTAA AGAAATTCGA TCTGTCCGGC CGCGTGGCGG TGGTCACGGG GGCGGGGCAG
GGCATCGGGC TTGCCTGCGC GGAAGCGCTT TGCGAAGCCG GTGCGGCGGT CCTGCTGACC
GATATCAGCA CGGAGCGCTG CGAGGCCGGC CGGGCGGCAC TCGCCGCCAA AGGATATACG
GTCGAGATCG ACCGTATCGA CATCGGCGAC AGCGCCTCCA TCAATGCGGT GGCGGACCGG
CTGGCAGATA GCGGCAGGGC GGCGGACATC CTCGTCGCAA ATGCCGGTAT CGCCCATGCC
GGCGTTCCGG CCGAAGAGCT TTCGGACGCC GATTGGGACC GGATGATCGG CATCAATCTC
AGCGGCGCCT TCCGATCTTG CCGGGCCTTC GGCAGGCACA TGCTCGCCAG GGGCAAGGGA
TCGATCGTCA CGATCGGTTC CATGTCCGGC ACGATCGTCA ACCGGCCGCA GCAGCAGGTT
CACTACAATG TGGCCAAGGC GGGCGTCCAC CACCTGACGC GCTCGCTCGC AGCCGAGTGG
GCGACCCGCG GCGTGCGGGT GAATTCCGTC GCGCCGACCT ATATCGATAC GCCGCTTCTG
ACTTTCGCCA AGGAAGACAA GCCGATGTAC GAGCAATGGC TGGACATGAC GCCGATGCAT
CGGCTCGGCC AGCCGGAGGA GATTGCCTCG GTCGTGCTGT TCCTTGCGTC CGACGCCTCC
AGCCTCATGA CGGGATCGAT CGTTTCCGCG GATGCCGGCT ACACTTGCTG GTAG
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| Protein sequence | MYLKKFDLSG RVAVVTGAGQ GIGLACAEAL CEAGAAVLLT DISTERCEAG RAALAAKGYT
VEIDRIDIGD SASINAVADR LADSGRAADI LVANAGIAHA GVPAEELSDA DWDRMIGINL
SGAFRSCRAF GRHMLARGKG SIVTIGSMSG TIVNRPQQQV HYNVAKAGVH HLTRSLAAEW
ATRGVRVNSV APTYIDTPLL TFAKEDKPMY EQWLDMTPMH RLGQPEEIAS VVLFLASDAS
SLMTGSIVSA DAGYTCW
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