| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2352 |
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| Symbol | |
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| ID | 5323213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2427810 |
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| End bp | 2428478 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791290 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001328019 |
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| Protein GI | 150397552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00492029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGGGA GCACCTCGAA GCTGGTGATT TTCGATTGTG ATGGCGTGTT GGTGGACAGC
GAGCCGATTT CGCTTGAGGT TCTTGTGGAA GCGCTGGCGG CCGCCGGCGT TGCGATGACG
ACGGAGGAGG CGAGCGAGCG CTTCCTTGGC CGCAGCCTCA AGACCATGTC GGCCATCCTG
CATGAAGAAC ACGGGCTTGC GACCGACGAG GCTTTTCTCG AGGGGATGCG GACCCGGCTC
TATGCGCGCT TTCGCGAGGA ATTGAGGCCC GTCGCCGGCA TACGCGAGGC GGTCGAACGG
CTGGGGACCG CCCATTGTGT GGCTTCGTCG AGCCAGCCTG AGCGCATTCG TCTTTCGCTG
ACGGTGACGG GGCTCATCGA TCTTTTTGAG CCAAGTATTT TCAGCGCCAG CATGGTGTCA
CGCGGCAAGC CGGCGCCCGA CCTTTTCCTG CATGCAAGTG CCGAGATGGG GTACGATCCG
TCCGACTGCG TCGTCGTCGA AGACAGCCCG GCGGGCATCG AGGCCGCAAA GGCCGCGGGC
ATGCGGGTCT TCGCATTTGC GGGGGCCAGC CATGCGCGAA ACGAGCGTCA TCGGCGGGTG
CTTGCCAGTC TTGACCCCGA CGTGCTGTTT GACGACATGC ATGAATTGAT ACAGTTTGTG
CGGCAATAG
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| Protein sequence | MAGSTSKLVI FDCDGVLVDS EPISLEVLVE ALAAAGVAMT TEEASERFLG RSLKTMSAIL
HEEHGLATDE AFLEGMRTRL YARFREELRP VAGIREAVER LGTAHCVASS SQPERIRLSL
TVTGLIDLFE PSIFSASMVS RGKPAPDLFL HASAEMGYDP SDCVVVEDSP AGIEAAKAAG
MRVFAFAGAS HARNERHRRV LASLDPDVLF DDMHELIQFV RQ
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