Gene Smed_2319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2319 
Symbol 
ID5323180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2400098 
End bp2400481 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content58% 
IMG OID640791257 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_001327986 
Protein GI150397519 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.622069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG ATACGCAGCG CCATCCATCC ATCGGGCCTG CCCATCCGGG TGAGATGCTG 
GGTGAGATCA TGATACCCGC CACTGGCAGG AGCAAGGCGG AGATCGCACG CCGGCTCGGC
GTCTCCCGGT CTACCCTCTA CGATATTCTG AACCAGAAGC AGCCGGTGAC TCCTGCAATT
GCAGTGCGTC TGGGTAAGCT TTTTGGAGAT GGGCCCGGCA TCAGGATGCA GGCGGCTTAC
GACACATGGC ACGCTGGCGT GAGATCGACG TCAGCGGCAT TGAGACCTTG GGTCGACCTA
CTGCATGTTT CCTTTAATCG GATCCGATTG AAGGACAAAA ACATGCAGCA GATCAAAGTG
CTACAGCGGC CTTTGTGCGT CTGA
 
Protein sequence
MATDTQRHPS IGPAHPGEML GEIMIPATGR SKAEIARRLG VSRSTLYDIL NQKQPVTPAI 
AVRLGKLFGD GPGIRMQAAY DTWHAGVRST SAALRPWVDL LHVSFNRIRL KDKNMQQIKV
LQRPLCV