Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2313 |
Symbol | |
ID | 5323174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2392269 |
End bp | 2393111 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640791251 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001327980 |
Protein GI | 150397513 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0326071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.242877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC CGTCTCTCTA TTTCAGTAAT TCGCAGGTAA CCGCCGTCCG CTTGATCTGG ATGACGGTGG CGGCCATCCT CGCGCTAATG ACGGTCTTCC CTTTGTTGTG GATGGTCTCG ATCGCCTTCA AGGGCGCTCA GGAGTCGTTT TCTCCGGCGC TGCTGCCGTC GGCGCCGACC TGGTCGAACT TCGTCTATGT GTTGACCGAG GTGCCGTTCA TCCGCTATAT GCTGAACAGC CTTTTCGTGT CGGTCACCGT CACGGTGGTG GCGCTGTTCT TCCATTCGAT GGCGGGTTAC GCGCTGGCCA GGCTGCGCTT CCCGGGCCGG GAACTGATCT TCCTCGCCAT CTTCTCGACT CTGCTCGTGT CGCTGCCGGT CGTCATCGTG CCGCTGTTCA TCATCGTGCG CGCCATGGGC ATGCTGAACA CCTATGGCGG GATCATCATT CCGTCGATCT TCAACGCCTT CGGCATCTTC CTGCTCAGGC AATATTATCT GTCCTTGCCG CGTGAAATCG AGGAGGCGGC CGTGATGGAC GGCGCCGGAT ACTGGCGCAT CTATTGGAGC GTCATCCTGC CTCTGTCCAA GCCAATTCTG TCGGCACTGG CCATCCTGTT CTTTCTCGCC AACTGGAATG CCTTTCTGTG GCCGCTGACG GTCGCATCCG ACCAGAAATT CTGGGTCGTG CAGGTCGGTA TCGCCAACTT CAAGAGCGAG TATTCGGCGG CCTGGAACTA CATGTTGGCG GCTTCGACGA TCGTTGCCAT CCCCACCCTC GTCCTGTTCC TGGTCTTCCA ACGGCAGATC ATGGACTCGA TAAAGACAAG CGGTCTGAAA TGA
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Protein sequence | MSKPSLYFSN SQVTAVRLIW MTVAAILALM TVFPLLWMVS IAFKGAQESF SPALLPSAPT WSNFVYVLTE VPFIRYMLNS LFVSVTVTVV ALFFHSMAGY ALARLRFPGR ELIFLAIFST LLVSLPVVIV PLFIIVRAMG MLNTYGGIII PSIFNAFGIF LLRQYYLSLP REIEEAAVMD GAGYWRIYWS VILPLSKPIL SALAILFFLA NWNAFLWPLT VASDQKFWVV QVGIANFKSE YSAAWNYMLA ASTIVAIPTL VLFLVFQRQI MDSIKTSGLK
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