Gene Smed_2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2308 
Symbol 
ID5323169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2387981 
End bp2388724 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID640791246 
Productpyridoxamine 5'-phosphate oxidase-related FMN-binding 
Protein accessionYP_001327975 
Protein GI150397508 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0748] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.547637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA AACCCAATGT GCTGCGCGAG ACGGATGACG AGGCGCGCAA GCTCGCACGG 
GTGCTCCTTC GGTCGGCGAG AAGCGCCGCT CTGGCCGTGA CGGAACCGGG GAGCGGCGGC
TTTCCTTTCG TCAGCCGCGT CCTCGTCGGC ATCGATATCG ACGGCACGCC CGTCATTCTG
GTGTCGCGGC TATCGACACA TACGCAGGCG CTCACCGCAG ACCGGCGCGC TTCGCTGCTG
ACCGGAGAGC CTGGCAAAGG CGACCCGCTC GCCCATCCTC GGCTGACCGT CCAATGCGCT
GCGGAGGCGG TTCCGCGGGA TGGCCCCCTT CACCAGCGTC TTCGCGAGCG CTTCCTCCGC
CGGCACCCCA AGTCCAAGCT TTATGTCGAT TTTCCGGACT TCGGCTTCTT CCGTCTCAAG
CCGCTTCGGG CGAGCCTGAA TGGCGGTTTC GGCCGCGCCT ATGTGCTGAC GGCAGAGGAC
CTCGCCATCG CTTCACCGGC CGCCGACGCG CTTGCGGAAA TGGAAGGCGG CGCGATAGAA
CACATGAACA GTGATCACGC CGACGCCGTG AGACATTATG CAACCGGGCA TTGCCACGCC
CCCGAAGGCG ACTGGAAGAT CGTCGGCATC GATGCGGCGG GTCTCGACCT TTCGGACGGG
GACCGTCTGC GCCGCCTCGA ATTCGATACG CCCCTTGCCG AGACAGCCGA ATTACGGCCA
TTTCTAAAAA AACTTAACCG TTAA
 
Protein sequence
MSEKPNVLRE TDDEARKLAR VLLRSARSAA LAVTEPGSGG FPFVSRVLVG IDIDGTPVIL 
VSRLSTHTQA LTADRRASLL TGEPGKGDPL AHPRLTVQCA AEAVPRDGPL HQRLRERFLR
RHPKSKLYVD FPDFGFFRLK PLRASLNGGF GRAYVLTAED LAIASPAADA LAEMEGGAIE
HMNSDHADAV RHYATGHCHA PEGDWKIVGI DAAGLDLSDG DRLRRLEFDT PLAETAELRP
FLKKLNR