Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2308 |
Symbol | |
ID | 5323169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2387981 |
End bp | 2388724 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791246 |
Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
Protein accession | YP_001327975 |
Protein GI | 150397508 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0748] Putative heme iron utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.547637 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAA AACCCAATGT GCTGCGCGAG ACGGATGACG AGGCGCGCAA GCTCGCACGG GTGCTCCTTC GGTCGGCGAG AAGCGCCGCT CTGGCCGTGA CGGAACCGGG GAGCGGCGGC TTTCCTTTCG TCAGCCGCGT CCTCGTCGGC ATCGATATCG ACGGCACGCC CGTCATTCTG GTGTCGCGGC TATCGACACA TACGCAGGCG CTCACCGCAG ACCGGCGCGC TTCGCTGCTG ACCGGAGAGC CTGGCAAAGG CGACCCGCTC GCCCATCCTC GGCTGACCGT CCAATGCGCT GCGGAGGCGG TTCCGCGGGA TGGCCCCCTT CACCAGCGTC TTCGCGAGCG CTTCCTCCGC CGGCACCCCA AGTCCAAGCT TTATGTCGAT TTTCCGGACT TCGGCTTCTT CCGTCTCAAG CCGCTTCGGG CGAGCCTGAA TGGCGGTTTC GGCCGCGCCT ATGTGCTGAC GGCAGAGGAC CTCGCCATCG CTTCACCGGC CGCCGACGCG CTTGCGGAAA TGGAAGGCGG CGCGATAGAA CACATGAACA GTGATCACGC CGACGCCGTG AGACATTATG CAACCGGGCA TTGCCACGCC CCCGAAGGCG ACTGGAAGAT CGTCGGCATC GATGCGGCGG GTCTCGACCT TTCGGACGGG GACCGTCTGC GCCGCCTCGA ATTCGATACG CCCCTTGCCG AGACAGCCGA ATTACGGCCA TTTCTAAAAA AACTTAACCG TTAA
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Protein sequence | MSEKPNVLRE TDDEARKLAR VLLRSARSAA LAVTEPGSGG FPFVSRVLVG IDIDGTPVIL VSRLSTHTQA LTADRRASLL TGEPGKGDPL AHPRLTVQCA AEAVPRDGPL HQRLRERFLR RHPKSKLYVD FPDFGFFRLK PLRASLNGGF GRAYVLTAED LAIASPAADA LAEMEGGAIE HMNSDHADAV RHYATGHCHA PEGDWKIVGI DAAGLDLSDG DRLRRLEFDT PLAETAELRP FLKKLNR
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