Gene Smed_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2301 
Symbol 
ID5323162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2379793 
End bp2380233 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content58% 
IMG OID640791239 
Producthypothetical protein 
Protein accessionYP_001327968 
Protein GI150397501 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.592364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.158552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGTG CGAACGAACG TCAGACAAAG CGCGCCAGAC GCCTGCGGCA GGCGGACAAC 
GATGCGGAAG CGCTCCTCTG GTCGGAACTG CGAGGCCGGC ATCTCAACGG CTTCAAGTTC
GTCCGGCAGC TTCCGCTTGG CCCTTACTTT GCGGACTTTG GGTGCCGTGA TGAACGTTTG
GTTGTCGAAG TCGACGGCAG CCAACATGCG AACAGAAGTA GCGATATCAG GCGGGACGAA
AACATGGTCG CAACTGGCTG GAGCGTGGTG CGCTTCTGGA ACATGCAAAT CTTCAATGAC
CGTCCATCGG TGCTGGAGAC GATCGTGGCG TTTCTGGAGA AGCGCTTGCT TGGGGAAGTA
AGGACAGCGG ATTTGACGTC CATTCCGGCG AAGAGACAGT TGGAGGCCGA AGCAGAGCAA
ATGAGGGCCA TCGCCGTATG A
 
Protein sequence
MRGANERQTK RARRLRQADN DAEALLWSEL RGRHLNGFKF VRQLPLGPYF ADFGCRDERL 
VVEVDGSQHA NRSSDIRRDE NMVATGWSVV RFWNMQIFND RPSVLETIVA FLEKRLLGEV
RTADLTSIPA KRQLEAEAEQ MRAIAV