| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2284 |
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| Symbol | |
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| ID | 5323145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2361258 |
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| End bp | 2361827 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791222 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001327951 |
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| Protein GI | 150397484 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.212351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCCGG ATCGCGAATG GACGCGCGAT CCGGCACGTC TCACTGGAAG AGCAATGCGC
CCAGCGGCAG AAATGAAGGA CTTCAGACGG GATTTGGTCA GCCTGCTGCC CAAATTGCGT
CGCTTCGCCA TGACGCTGAC CCGCAACGCC AGTGACGCCG ACGACCTCGT CCAGGAGGCT
TGCGAACGCG CCATTGCACG CAGCCATCTC TGGAATGGCG ACGGTCGCCT GGAAAGCTGG
GTCTATGCGA TGACGCGCAA CCTGTGGGTG GATGAAATCC GCAAGCGCAA GGTGCGCAGC
GGCAGTGCGG CCGCTGTTTT CGAACTGGAC CAACTGAACG TCGAAGCGAC AGCCGAGAAG
GCTGTCTATG TCAATCAGGT GCAGAAGATG ATCCTCTCTA TGCCTGAGGG ATTGGCGAGC
GTTTTCCTCC TCGTCAATGT CGAAGGCCAT AGTTACCGGG AAACGGCAGA GATCCTCGGC
ATTCCGGTCG GCACCGTCAT GAGCAGATTG TCGACGGCGC GGCTGAGGCT TGCAGCCATG
TTATCCGAGA GTACCGAAAG GAGGGCCTGA
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| Protein sequence | MRPDREWTRD PARLTGRAMR PAAEMKDFRR DLVSLLPKLR RFAMTLTRNA SDADDLVQEA
CERAIARSHL WNGDGRLESW VYAMTRNLWV DEIRKRKVRS GSAAAVFELD QLNVEATAEK
AVYVNQVQKM ILSMPEGLAS VFLLVNVEGH SYRETAEILG IPVGTVMSRL STARLRLAAM
LSESTERRA
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