| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2253 |
|---|
| Symbol | |
|---|
| ID | 5323114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2329853 |
|---|
| End bp | 2330956 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640791191 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001327920 |
|---|
| Protein GI | 150397453 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1565] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.262355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAATC CTCTCGCCGA CAAGATCAAG GCGCTGATCC GGGCCAATGG ACCGATCAGC
GTTACCGACT ATTTCTCCCT CTGCCTTGCT GATCCGCAGC ACGGCTACTA TCGCGTCCGT
GAGCCTTTCG GGGCGGCTGG CGACTTCACC ACCGCGCCGG AGATCAGTCA GCTTTTCGGC
GAGATGATCG GCATATTCCT CGTGCATGCC TGGCAGCAGC ACGGAGCACC CGCAAATGCC
ATTATAAGCG AGATCGGGCC AGGTCGCGGC ACGATGATGT CCGACATGTT GCGCGTCATC
CGCCGGCTGG CGCCGACGCT TTACGGGACG GCGACGGTGC ATCTCGTCGA GACCAGCGAT
CGGCTTCGCG AGGTGCAAGC CAAGGGTTTG GCCGAGCACG AAGGCAAGAT TCGCTGGCAT
GAGAGCTTCG ACAGCCTGCC GTCGGGATTC CTGCTCCTGG CTGCGAACGA GCTTTTCGAC
GCAATCCCGA TCCGTCAGTT CGTGCGGACC CCGCAGGGCT TCCGCGAACG CATGATCGGC
CTCGATACGG AGGATCGACT GACATTTGCC GCAGGCGCTG GCGGCATTGA TCCGACGCTT
CTTCCCACTC CGGCCGCCTC TGTTCCCGAA GGCACGATCT TCGAAATCGC GCCGGCTCGC
GACGCCGTGA TGGCCGCGCT CTGCGAGCGC CTTCGCGCCG GCGGCGGCAC GGCGCTCATC
ATCGACTACG GCCATCTGGC GACCGGCTAC GGCGACACTC TGCAGGCCGT GCGAAACCAT
GAATACGATC CGCCACTCGC CAATCCGGGT TTCGCCGACA TGACCAGCCA TGTCGATTTC
GAGCAATTGG CGAGCCGGGC GAAAGCGGAA GGGGTACAGG TAAACGGACT CGTCCGTCAG
GGCGATTTCC TGGTCGGCCT CGGCCTCCTG GAACGCGCCG CAGCGCTTGG CCGGGACAAG
GGCGAATCGA CGCAGGAAGG CATTCGCGAC GATGTCGAAC GGCTTGCGGG CTCCGGCCCG
GGCAAGATGG GAGAATTGTT CAAGGTACTG GTGGTCAGCA GTCCGGAAGT CGCCCTGGCA
CCCTTTCAGA AGAAGGCGCC CTAG
|
|---|
| Protein sequence | MTNPLADKIK ALIRANGPIS VTDYFSLCLA DPQHGYYRVR EPFGAAGDFT TAPEISQLFG
EMIGIFLVHA WQQHGAPANA IISEIGPGRG TMMSDMLRVI RRLAPTLYGT ATVHLVETSD
RLREVQAKGL AEHEGKIRWH ESFDSLPSGF LLLAANELFD AIPIRQFVRT PQGFRERMIG
LDTEDRLTFA AGAGGIDPTL LPTPAASVPE GTIFEIAPAR DAVMAALCER LRAGGGTALI
IDYGHLATGY GDTLQAVRNH EYDPPLANPG FADMTSHVDF EQLASRAKAE GVQVNGLVRQ
GDFLVGLGLL ERAAALGRDK GESTQEGIRD DVERLAGSGP GKMGELFKVL VVSSPEVALA
PFQKKAP
|
|---|
| |