Gene Smed_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2250 
Symbol 
ID5323111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2327478 
End bp2327978 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content58% 
IMG OID640791188 
Producthypothetical protein 
Protein accessionYP_001327917 
Protein GI150397450 
COG category[S] Function unknown 
COG ID[COG5465] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.338275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT TGGAAATGGA AGCCGAGCGC CAGTCCAACC CGGTCGATAT GATCGAGTTC 
GTCGCCGCGA ACAATGACTG GTCCTTCGAG CGTTCCGGCG AAGACGAGAT CGCCATGACC
GTCGAGGGCA GGTGGGCGGA CTATCATGTT TCCTTTTCCT GGATGGAAGA GTTCGAGGCG
CTGCATCTGG CTTGTGCTTT CGACATCAAA GTGCCGGACA GCCGGGCAAA CGAAGTGATC
CGGCTTCTGT CCCATATCAA CGGGCAGGTG CTGATGGGTC ATTTCGATCT GTGGCGCCAA
GAAGAAGTCA TCATCTTCCG GCAATCTCTG TTGCTTGCTG GCGGGGCGGA GCCTACCAAC
CAGCAAGTCG AAGTGCTCCT GTCGAATGCG CTCGACGCCT GCGAATCCTA TTTCCAGGCG
TTCCAGTTCG TCGTCTGGTC GGGCATGGAT GCGCAGCGCG CGGTGGACGC GGTTCTGTTC
GAGACCGTTG GGGAGGCATG A
 
Protein sequence
MSLLEMEAER QSNPVDMIEF VAANNDWSFE RSGEDEIAMT VEGRWADYHV SFSWMEEFEA 
LHLACAFDIK VPDSRANEVI RLLSHINGQV LMGHFDLWRQ EEVIIFRQSL LLAGGAEPTN
QQVEVLLSNA LDACESYFQA FQFVVWSGMD AQRAVDAVLF ETVGEA