Gene Smed_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2249 
Symbol 
ID5323110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2326652 
End bp2327476 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID640791187 
Productpyrroline-5-carboxylate reductase 
Protein accessionYP_001327916 
Protein GI150397449 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATCG CCGTTAAGGG TCCGATCGTG CTTGTCGGTG CCGGCAATAT GGGCGGCGCC 
ATGCTCGCGG GTTGGCTGAA AAGCGGGATC GCTGGTGGCG ATCTTCTCGT AATCGATCCC
GGACCGCCGC CTTCCATGGC GAAGCTGTTG GCGGATAACG GTGTCCGACA TTCGACGTCA
GCTCCGGCGG GGATCAAAGC GCGCGTGGTC TTCCTTGCCG TCAAGCCGCA GGTGATGGAG
TCGGCTCTGC CGCCCGTAAA GGGGCTGGTC GGTTCCGAAA CCGTGATCGT TTCCGTCGCC
GCGGGCAAGA CGCTCGGCTT CATCGAGCGC CACCTCGGCG AGGCTGCAAC GGTTCGCGCC
ATGCCGAACA CGCCCGCCAT GATCGGGCGC GGTGTGACCG GTGCCTTCGC AAATGCCCGC
GTCAGCGAAG CGCAGCGCGC GCTGGTGCAC GATCTGCTGA AAGTCAGCGG TCCGGTTGAA
TGGGTCCGGA CCGAAGCGGA TATAGATGCC GTGACCGCCG TCTCCGGCAG CGGCCCCGCT
TACGTCTTCT ATCTCGTCGA GTGCATGGCA GAGGCCGGGC GCAAGGCCGG CCTCGAGGCG
GACCTAGCCA TGCGTCTCGC TCGGGAAACC GTCGCGGGGG CTGGTGAACT CCTCCATCAG
TCCCCCGACG ATGCAGCGCG CCTGCGCCAG AACGTTACGT CACCCGGCGG CACCACGGCT
GCGGCGCTCG ACGTTCTGAT GGGAGAGGGC GGCATGCAGC CGCTCTTCGA TAAGGCCATT
GCAACAGCCC GCAAGCGCGC AGAAGAGCTG GCCGGCTCGC GGTAG
 
Protein sequence
MSIAVKGPIV LVGAGNMGGA MLAGWLKSGI AGGDLLVIDP GPPPSMAKLL ADNGVRHSTS 
APAGIKARVV FLAVKPQVME SALPPVKGLV GSETVIVSVA AGKTLGFIER HLGEAATVRA
MPNTPAMIGR GVTGAFANAR VSEAQRALVH DLLKVSGPVE WVRTEADIDA VTAVSGSGPA
YVFYLVECMA EAGRKAGLEA DLAMRLARET VAGAGELLHQ SPDDAARLRQ NVTSPGGTTA
AALDVLMGEG GMQPLFDKAI ATARKRAEEL AGSR