Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2249 |
Symbol | |
ID | 5323110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2326652 |
End bp | 2327476 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640791187 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_001327916 |
Protein GI | 150397449 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCATCG CCGTTAAGGG TCCGATCGTG CTTGTCGGTG CCGGCAATAT GGGCGGCGCC ATGCTCGCGG GTTGGCTGAA AAGCGGGATC GCTGGTGGCG ATCTTCTCGT AATCGATCCC GGACCGCCGC CTTCCATGGC GAAGCTGTTG GCGGATAACG GTGTCCGACA TTCGACGTCA GCTCCGGCGG GGATCAAAGC GCGCGTGGTC TTCCTTGCCG TCAAGCCGCA GGTGATGGAG TCGGCTCTGC CGCCCGTAAA GGGGCTGGTC GGTTCCGAAA CCGTGATCGT TTCCGTCGCC GCGGGCAAGA CGCTCGGCTT CATCGAGCGC CACCTCGGCG AGGCTGCAAC GGTTCGCGCC ATGCCGAACA CGCCCGCCAT GATCGGGCGC GGTGTGACCG GTGCCTTCGC AAATGCCCGC GTCAGCGAAG CGCAGCGCGC GCTGGTGCAC GATCTGCTGA AAGTCAGCGG TCCGGTTGAA TGGGTCCGGA CCGAAGCGGA TATAGATGCC GTGACCGCCG TCTCCGGCAG CGGCCCCGCT TACGTCTTCT ATCTCGTCGA GTGCATGGCA GAGGCCGGGC GCAAGGCCGG CCTCGAGGCG GACCTAGCCA TGCGTCTCGC TCGGGAAACC GTCGCGGGGG CTGGTGAACT CCTCCATCAG TCCCCCGACG ATGCAGCGCG CCTGCGCCAG AACGTTACGT CACCCGGCGG CACCACGGCT GCGGCGCTCG ACGTTCTGAT GGGAGAGGGC GGCATGCAGC CGCTCTTCGA TAAGGCCATT GCAACAGCCC GCAAGCGCGC AGAAGAGCTG GCCGGCTCGC GGTAG
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Protein sequence | MSIAVKGPIV LVGAGNMGGA MLAGWLKSGI AGGDLLVIDP GPPPSMAKLL ADNGVRHSTS APAGIKARVV FLAVKPQVME SALPPVKGLV GSETVIVSVA AGKTLGFIER HLGEAATVRA MPNTPAMIGR GVTGAFANAR VSEAQRALVH DLLKVSGPVE WVRTEADIDA VTAVSGSGPA YVFYLVECMA EAGRKAGLEA DLAMRLARET VAGAGELLHQ SPDDAARLRQ NVTSPGGTTA AALDVLMGEG GMQPLFDKAI ATARKRAEEL AGSR
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