| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2226 |
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| Symbol | |
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| ID | 5323087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2304702 |
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| End bp | 2306645 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791164 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001327893 |
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| Protein GI | 150397426 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCGAG TCAGCAGGCT AGCGGAATGC TGCCTGTGGT TTACACGCGA GCACCCGCGA
CGCCATATTG TACGCACCGA CGAAAGCGAT TCCATGCCCG AAAGCCACAG CACCGCCTGC
CTGTTCGAAA CGGAAGGCGT CCGCAATCCG CTCGATCTCT TGAAACGCAT TTACGGCTAT
TCCACCTTCC GCGGTCAGCA GCAGGAGGTC ATCGAGCATG TGGTTGCCGG CGGCGATGCC
GTCGTGCTTT TTCCGACCGG GGCGGGCAAA TCGCTCTGCT TCCAGATTCC GGCGCTCTGC
CGTGGCGGCG TCGGCGTCGT CGTTTCGCCG CTGATCGCTT TGATGCGCGA TCAGGTGGAG
GCGCTCAAGC AGCTCGGCGT CCGGGCGGCC GCCCTCAATT CCTCCCTGAC GCGGGAGGAG
GCGATTGCCG TTCGCCGTTC GCTTTCGACC GGCACTCTGG ACCTCATCTA TGTGACGCCG
GAACGCGCCG TCACCGATGG TTTCGCCGAA ATGATCGCCG GTGCCGAAAT TGCTCTTTTC
GCGATCGACG AGGCCCATTG CGTTTCGCAA TGGGGACATG ACTTTCGCCC GGAATATCGC
GGCCTCGGCT GCCTCGCCGA ACGCTTCCCG AACGTACCGC GCATCGCGCT CACGGCCACC
GCGGATCCGC ACACACGCGC CGACCTGATC GAGCGCCTGG CACTTGGCGC GGCGCGGGTT
TTCACCTCCA GTTTCGACCG CCCGAACATC GCCTATGAGA TCGTGGAGCG CGATCAGCCG
CGCCAGCAAT TGCTGCGCTT CCTGTCGCGC TTCAAGGATG CAAGCGGCAT CGTTTATTGC
CTCTCTCGCG CGAAGGTCGA GGACACGGCG GAATGGCTGA ATACGCAGGG GATTCGTGCG
CTCCCCTATC ACGCCGGCAT GGACAGGGCG TTGCGTGACG CGCATCAGGA CGCTTTCCTC
AAGGAGGAGA ATTTGTGCCT CGTCGCAACC GTCGCCTTCG GTATGGGAAT CGACAAACCG
GATGTGCGCT ACGTTGCCCA TCTGGATCTG CCAGGTTCGG TGGAGGCTTA TTACCAGGAG
ACGGGGAGGG CCGGGCGCGA CGGGCTGCCT TCGGAAGTGT GGATGGCCTA TGGCATGGCC
GACGTCATCC AGCGCCGGCG AATGATCGAC GAGGGCGGTG CGCCCGAGGA GGTCAAGAGA
ATTGAGCGGG CGAAACTCAA TTCGCTGCTT GCAATTTGCG AGACGGCAGG CTGCCGGCGC
CAGGCGGTCC TCGCGCATTT CGGCGAAGCG CATCCGGGCG GGTGCGGCCA TTGCGACACC
TGCCTGAAAC CGGTCGAGAC CTGGGACGGT ACGGAAGCGG CGATCAAGGC GCTCGCGGCC
GTTTACAGGA CCGGCGAGCG TTTCGGAACC GGCCATCTGA TCGATGTACT TATGGGCAGC
GTGAACGAAA AGACCGAGCG CTTCGGGCAT GTCGACATGC CGGTGTTCGG GGCCGGCAAG
GACCTGCCGG CGCGCACCTG GCAATCCATC TTCCGCCAAC TGCTCGCCGC GGGGCTCATC
TCCGTGGATC ACGGCGCCTT CGGGGCATTG AAACTCGAGC CTGAGGCACG CAGCGTCTTC
CGCCGCGAGC GGCAGGTGCT CTTCCGCAAG GACCGCCCGA GTTCCGGTAA GGCGGCGCGC
GGCCAGAAGG CGACGCGAGA GCGGTCCGAC CTCGCGGGCT CCGATCTCGA GTTGTTTGAG
CGGCTTCGCT CCGAGCGTCT TACTATCGCC CGCGAGATGG ACGTGCCGCC CTATGTCGTC
TTCCCGGACG CTACCTTGAT TGCGCTTGCC AAGCGCCGAC CGCGCGATTT CGACGATCTC
CTGGGCGTCC CCGGTATCGG AGAGACCAAG CGGGAGAGGT ACGGACAGGC TTTCCTCGCG
GTGATCGAGG CTTTCGAGGG CTGA
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| Protein sequence | MRRVSRLAEC CLWFTREHPR RHIVRTDESD SMPESHSTAC LFETEGVRNP LDLLKRIYGY
STFRGQQQEV IEHVVAGGDA VVLFPTGAGK SLCFQIPALC RGGVGVVVSP LIALMRDQVE
ALKQLGVRAA ALNSSLTREE AIAVRRSLST GTLDLIYVTP ERAVTDGFAE MIAGAEIALF
AIDEAHCVSQ WGHDFRPEYR GLGCLAERFP NVPRIALTAT ADPHTRADLI ERLALGAARV
FTSSFDRPNI AYEIVERDQP RQQLLRFLSR FKDASGIVYC LSRAKVEDTA EWLNTQGIRA
LPYHAGMDRA LRDAHQDAFL KEENLCLVAT VAFGMGIDKP DVRYVAHLDL PGSVEAYYQE
TGRAGRDGLP SEVWMAYGMA DVIQRRRMID EGGAPEEVKR IERAKLNSLL AICETAGCRR
QAVLAHFGEA HPGGCGHCDT CLKPVETWDG TEAAIKALAA VYRTGERFGT GHLIDVLMGS
VNEKTERFGH VDMPVFGAGK DLPARTWQSI FRQLLAAGLI SVDHGAFGAL KLEPEARSVF
RRERQVLFRK DRPSSGKAAR GQKATRERSD LAGSDLELFE RLRSERLTIA REMDVPPYVV
FPDATLIALA KRRPRDFDDL LGVPGIGETK RERYGQAFLA VIEAFEG
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