Gene Smed_2207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2207 
Symbol 
ID5323067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2286888 
End bp2287367 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content63% 
IMG OID640791144 
Producthypothetical protein 
Protein accessionYP_001327874 
Protein GI150397407 
COG category[S] Function unknown 
COG ID[COG5500] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.260587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACCC TTGTTCCTGT GCTCGCATTT GCCGCCGTGA TCGGATCCGG CCTGATGGCC 
GGGCTGTTCT TCGTCTTTTC GGTCTGCATT ATGCAGGCGC TTTCGCGACT CCCGCCCGAG
CAAGGCGTCG CCGTGATGAA CGCCATTAAC GTGGTGATCC AGAACCCGCT GTTTCTCATC
GCCTTCATGG GAACGGCGCT GCTTGGCCTG GTGCTCCTGG TCATGGCCGT CATCTGGGGA
GGGCAGGGGA GCTATTTCCT GGCTGCTGGC GGACTCGTCT ATCTCATCGG CACGCTCGCG
GTGACGATAG CCGTCAACGT GCCGCTGAAC GAAGCGCTTG CCGCCGCCCC TGCCGGACAA
GGAGCCACCG AACTCTGGCA GCAGCGCTAT CTGACCGAAT GGGTCCGCTG GAACCACGTG
CGCAGCTTCG CTTCGACCGC TGCTCTGGCG CTCTTCGTCC TCGGCTTCGC CCGGACCTGA
 
Protein sequence
MVTLVPVLAF AAVIGSGLMA GLFFVFSVCI MQALSRLPPE QGVAVMNAIN VVIQNPLFLI 
AFMGTALLGL VLLVMAVIWG GQGSYFLAAG GLVYLIGTLA VTIAVNVPLN EALAAAPAGQ
GATELWQQRY LTEWVRWNHV RSFASTAALA LFVLGFART