| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2193 |
|---|
| Symbol | |
|---|
| ID | 5323053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2270794 |
|---|
| End bp | 2271549 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640791131 |
|---|
| Product | ferric iron reductase |
|---|
| Protein accession | YP_001327861 |
|---|
| Protein GI | 150397394 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4114] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.544293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00470622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCG GTGCGCGTGA AAGCATGGCG GTATTCGACG GGCCGAAAGG ACTGTCGGCG
GCCTTTGCCG GACCGCATGC CTGGTGCAAC GAGAAGATGA TGCTGTCGGA GAACCTCTCC
GACGGCATCT CGCTGCCCGA GTTCTTTGCC TCGGGCGCCT TCGACCGTGC GCTGTCGCTC
TATGCCGAGA CGTCCGGCGG CACCGACCGT CGCGCCGTCG CCTCCATGTG GTCGCTCTAC
TACTTCTCCG CGCTGACGAT TCCCTATGTC GTCGCCCGGG TGCTGGACCA CCAGGCGCTG
CCCGCTGCCT TCGACGGCAT GACGGTGGCA CTCTCCGCCG ACGGGCTGCC GCGTGCCTTC
GGAGTGGCGA CCACAGGCGA ATGGCGCGAC GACGACGCCA GCGACGTCTT TACCCTGATC
GGCTCGCTGA TGGACGAACA TCTTGCGAGG GTCGTGCCGC ATCTCAAGGC GACGGGCGGC
ATATCGCCGA GGCTCGCCTG GAACAACGCA GCCGTTTACA TCGATTATGC GCTTCGAACG
GCTGGCACCG ACCCCATGAG CGATCAGGCG GACGCCATGG TCGCCTGTCG CCTGATGCCC
AACGGCGGCG CCAACCCCTT CTTCGACTGC CTGCGTCAGG AGGAGGAAGA CGGGGCGCCC
GTCTGCCGGC GCAAGATCTG CTGTCTCAGG TATCTCCTCC CTGGCATCCC GAGCTGCGGC
AGTCTCTGTG CCCTTCCCAG TCAAAGGAAA CAATAG
|
|---|
| Protein sequence | MAAGARESMA VFDGPKGLSA AFAGPHAWCN EKMMLSENLS DGISLPEFFA SGAFDRALSL
YAETSGGTDR RAVASMWSLY YFSALTIPYV VARVLDHQAL PAAFDGMTVA LSADGLPRAF
GVATTGEWRD DDASDVFTLI GSLMDEHLAR VVPHLKATGG ISPRLAWNNA AVYIDYALRT
AGTDPMSDQA DAMVACRLMP NGGANPFFDC LRQEEEDGAP VCRRKICCLR YLLPGIPSCG
SLCALPSQRK Q
|
|---|
| |