Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2156 |
Symbol | |
ID | 5323016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2224913 |
End bp | 2226466 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791094 |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_001327824 |
Protein GI | 150397357 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCGA CAGGAGACAA ACACGTGAGT TCCGAAACCG GCACATACGA CCTTTTCGTC ATTGGCGGCG GCATCAACGG GGCAGGCATT GCCCGAGACG CGGCGGGGCG CGGGCTTTCC GTCCTGCTTT GCGAAAAGGA AGATCTGGCA CAGGGCACGA GTTCCCGCTC CGGCAAGCTC GTCCACGGCG GCTTACGCTA TCTCGAATAT TACGAGTTCC GCCTGGTGCG CGAGGCGCTG ATCGAGCGGG AGGTGCTGCT GGAGTCGGCA CCTCATATCA TCTGGCCGAT GCGTTTCGTG CTGCCGCACA ATCCGACCGA CCGGCCCGCC TGGCTCGTGC GCCTCGGCCT GTTTCTCTAT GATCATCTGG GTGGGCGCAA ACGCCTTCCC GGTACGCGGA TGCTCAACCT GCGCACGGCG CCGGAAGGTG CTCCGATCAA GCCGGCCTAT CGCAAAGCCT TCGAATATTC GGACTGTTGG GTAGACGACG CCCGTCTGGT CGTGTTGAAC GCGCTCGACG CGAAAAACAA AGGCGCGCGG GTCCTGACCC GTACCGCCTG CACCAGCGTT CGCCGGCGCG GCGAACTCTG GCATGTCGAG ATGACCGATG CGGAGACCGG GGCCAGGACC GAAGCCAAAG CGCGTTGCGT GGTCAACACT GCCGGGCCCT GGGTCAACGA CGTGATCGGC CGGGTCGCAG GACTGAATTC GAGCCGCAGC GTTCGCCTCG TCAAGGGCAG CCATATCGTC GTGCCGAAGT TCTGGGAGGG GCGTCAGGCC TATCTGGTCC AGAATCCCGA CAAGCGCGTG ATCTTCATCA ATCCGTACCA GAACGACCTG GCGCTGATCG GCACCACCGA TATTCCCTAT GAGGGGCGGC CGGAGGACGT GTCCGCCGAC GATAGCGAGA TTGATTATCT CCTGACGTCC GTGAACCGCT ATTTCAAGCA GCAAATGACG CCGCGCGACA TCCTTCACAG CTTCTCCGGT GTTCGGCCGC TTTACGACGA CAATGCCGAA AATCCGTCGG CAGTGACGCG CGACTACATT TTCGAGCTCG ATGCCCCGCA AAAGGGCGCC GCCGGGAGGG AAGCGCCGCT GCTCTCGGTA TTTGGCGGCA AGATCACGAC CTTCCGCAAG CTGTCCGAAC ACGCCTTGGA GCGACTGAAG CCCTTCTTTC CCGAGATGGG GCCGGCTTGG ACGGCGCGCT CGCACCTGCC GGGAGGCGAT ATGGCGGAAG CGGATTTCGA CCAGTTCCTC GGCGAGCTGC GCACACGCCA CCAGTGGTTG CCGGCGGATC TCGCCAAGCA TTATGCAAGG CTGTACGGCA CGCGCGCCGA TGAGCTGATC GGCAGCGCTG CCTCGCTCGA GGAGCTCGGC ACTGCGTTCA CCCCCCTCTT CAGGGAACGG GAAGCCCGCT TCCTCATCGA AAATGAATGG GTGCGCACGG CGGAAGACCT GATCGAACGC CGTACGAAGC ACGGCCTGCA TATGAGCGAA ACGGAGAAGC GGGCGTTCAG CGGCTGGTTC CAGGGTCAGC AGGCGGCGGC GTGA
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Protein sequence | MTSTGDKHVS SETGTYDLFV IGGGINGAGI ARDAAGRGLS VLLCEKEDLA QGTSSRSGKL VHGGLRYLEY YEFRLVREAL IEREVLLESA PHIIWPMRFV LPHNPTDRPA WLVRLGLFLY DHLGGRKRLP GTRMLNLRTA PEGAPIKPAY RKAFEYSDCW VDDARLVVLN ALDAKNKGAR VLTRTACTSV RRRGELWHVE MTDAETGART EAKARCVVNT AGPWVNDVIG RVAGLNSSRS VRLVKGSHIV VPKFWEGRQA YLVQNPDKRV IFINPYQNDL ALIGTTDIPY EGRPEDVSAD DSEIDYLLTS VNRYFKQQMT PRDILHSFSG VRPLYDDNAE NPSAVTRDYI FELDAPQKGA AGREAPLLSV FGGKITTFRK LSEHALERLK PFFPEMGPAW TARSHLPGGD MAEADFDQFL GELRTRHQWL PADLAKHYAR LYGTRADELI GSAASLEELG TAFTPLFRER EARFLIENEW VRTAEDLIER RTKHGLHMSE TEKRAFSGWF QGQQAAA
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