Gene Smed_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2149 
Symbol 
ID5323009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2218647 
End bp2219084 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID640791087 
Productribose-5-phosphate isomerase B 
Protein accessionYP_001327817 
Protein GI150397350 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CGATTGGAGC CGACAGCGCC GGTAAGCCCC TGCTCGACGT CATCGCCGCG 
CATCTCGCCA CGAAAAGCGG CCTCGAAGTG AAGGACCTGA GCCAGTCCGG CTATTATGCC
GATCTCTCCC GAGATCTGGC GCAGACGATC ACGGCAGGCG AAAACGAGCG TGGCATCCTG
ATCTGCGGTA CCGGCATTGG CGTATGCATC TCCGCCAACA AGGTGCCCGG CATCCGCGCC
GCGCTTACCC ACGACACCTA TTCGGCCGAG CGGGCAGCCA AGTCCAATAA TGCCCAGATC
ATCACCATGG GCGCACGCGT TATCGGCCCG GAATTGGCGA AATCGATCGT CGACACCTGG
CTTGCCTCCG AATTCGACCC GAACGGGCCG TCTGCGGCGA ATGTCGACGC GATCGATCGT
CTGGATGCGG TGAAGTAA
 
Protein sequence
MKIAIGADSA GKPLLDVIAA HLATKSGLEV KDLSQSGYYA DLSRDLAQTI TAGENERGIL 
ICGTGIGVCI SANKVPGIRA ALTHDTYSAE RAAKSNNAQI ITMGARVIGP ELAKSIVDTW
LASEFDPNGP SAANVDAIDR LDAVK