Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2137 |
Symbol | |
ID | 5322997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2203783 |
End bp | 2204844 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791075 |
Product | ABC transporter related |
Protein accession | YP_001327805 |
Protein GI | 150397338 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTCC TGCAACTGAC CAATATTCAG AAATCTTTCG GCCCGGTTCA GGTCGTGCAT AATTTCGACA TGGGGATCGA CAAGGGCGAG TTCGTTTCCT TCCTCGGCCC ATCCGGCTGC GGCAAGACAA CCATTCTGCG CATGATAGCC GGCTTCGAGA CGCCTTCGGG CGGGACGATT TTCATCGACG GCAAGGACCA GGGCGCGCTG AAGCCTAACC AGCGCAATAT CGGCATGGTG TTTCAGGCAT ATGCCCTCTT CCCGAACATG AACGTGCACG ACAATGTCGC TTTCGGTCTC AAGGTTGCGG GCGATTCGAA ACCGGAGATC GATAAACGGG TGAAGCAGAT GCTCGGGCTG ATCAAGCTCG AGCATCTGGC GGACCGCTTC CCCTATCAAC TCTCCGGCGG CCAGCAGCAG CGCGTGGCAC TTGCCCGAGC ACTGGCCGTC AAGCCGCAGG TGCTTCTGCT CGACGAGCCG CTTTCCGCAC TTGACGCGAA GATTCGCGTT TCTCTGCGCG AGGAAATTCG TCAGATTCAG CAACAGCTCG GCATCACCAC CGTATTCGTG ACGCACGACC AGGAGGAAGC CCTGTCGATT TCCGACCGGA TCGTCGTCAT GAATGCCGGC CGCGCCGACC AGATCGGCAC TCCGTTCGAG ATCTACAACA CCCCGGCGAC GCGCTTCGTC GCCTCCTTCG TCGGCACGCT CAACATCATC GAGGGTAAGG TGGCCGATCC CGCAATCGGC GCGGTCACCA TCGGCGGCCA GCAGATTTCG CTGAGCGAGC CGATAACAGG GGCAAAGGGC GGCGACAGCA TTTCGCTGGC ACTCAGGCCG GAAGCGGGCT CGATCGCCGA GGGCGCGCGG GGCGATACCG CACTTCCGGG CAAGGTCGTA TCGAGGAGCT TTCTCGGCTC CGTCATCCGC ACCAAGCTGC GGGTCGGCGA GGACATCATC TCCTTCGATA TGTTCAATGA CCCGGGCATG ATACCGCCCG TTGCCGGGGA AAGCGTCACG CTTCGCTTCG CGGCAAAGGA CCTGCTCGTC ATCCGCGAAT AG
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Protein sequence | MAFLQLTNIQ KSFGPVQVVH NFDMGIDKGE FVSFLGPSGC GKTTILRMIA GFETPSGGTI FIDGKDQGAL KPNQRNIGMV FQAYALFPNM NVHDNVAFGL KVAGDSKPEI DKRVKQMLGL IKLEHLADRF PYQLSGGQQQ RVALARALAV KPQVLLLDEP LSALDAKIRV SLREEIRQIQ QQLGITTVFV THDQEEALSI SDRIVVMNAG RADQIGTPFE IYNTPATRFV ASFVGTLNII EGKVADPAIG AVTIGGQQIS LSEPITGAKG GDSISLALRP EAGSIAEGAR GDTALPGKVV SRSFLGSVIR TKLRVGEDII SFDMFNDPGM IPPVAGESVT LRFAAKDLLV IRE
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