Gene Smed_2085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2085 
SymbolmraY 
ID5322944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2142578 
End bp2143678 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID640791022 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001327753 
Protein GI150397286 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0499582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000454332 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGATCT GGCTTGTGGA ACTGGCGGAC CACTTTCAAT TCTTCAATCT CTTTCGCTAC 
ATCACCTTCC GCACGGGCGC GGCTCTGTTC ACCTCTGCCT TGATCGTGTT CCTGTTCGGT
CCGGCCATGA TCGCTTCGTT GCGCATCCGT CAGGGCAAGG GCCAGCCTAT CCGCGCCGAC
GGCCCTCAGA CGCACTTCAA GAAAGCCGGG ACGCCGACCA TGGGAGGGTT GATGATCCTC
GCGGGCATCG TGGTGTCCTC GCTGCTTTGG GCCGATCTAT CCAGCATCTA TGTCGTCTCG
ACGCTTCTGG TAACGCTGGG TTTCGGCGCG ATCGGCTTCT ACGACGACTA TCTCAAGGTG
ACGAAACAAT CGGACAAAGG CTTCTCCGGC AAAGCCCGGC TTGGCATCGA GTTCGTGATC
GCCTCGATCG CCGTCTTCTT CATGATGCAG GCTGCGCTTT CGGCAGGGGC GGCGGGCTCC
ACTTTCGGGT CATCGGTGAC CTTTCCATTC TTCAAGGACC TGATGCTCAA TCTCGGCTAT
TTCTTCGTGC TGTTCGGCGG CTTCGTCATC GTCGGCGCGG GAAATTCCGT AAATCTGACC
GATGGCCTGG ACGGGCTCGC GATCGTCCCT GTCATGATCG CCTCGGCCGC GTTCGGGCTG
ATCGCCTATC TCGCCGGCAA CGCTGTCTTT GCCAACTACC TGCAGATCCA TTTCGTGCCC
GGCACCGGCG AACTCGCGGT GATCCTCGGC GCGGTGATCG GCGCAGGCCT TGGCTTCCTG
TGGTTCAACG CGCCGCCCGC CGCGATCTTC ATGGGCGACA CCGGTTCGCT TGCCCTCGGC
GGTCTCATAG GCACCGTCGC CGTCGCAACC AAGCACGAGA TCGTCATGGT CATCATCGGC
GGGCTCTTTG TCATGGAGAC ATTGTCTGTC ATCATTCAGG TCTTCTGGTT CAAGCGCACC
GGGCACCGGG TGTTCCTGAT GGCACCGATC CACCATCACT TCGAGAAGAA GGGCTGGACG
GAAAGCCAGG TGGTGATCCG CTTCTGGATC ATCGCCGTGA TCCTTGCGAT GGTCGGTCTC
TCGACGCTGA AGCTTCGGTG A
 
Protein sequence
MLIWLVELAD HFQFFNLFRY ITFRTGAALF TSALIVFLFG PAMIASLRIR QGKGQPIRAD 
GPQTHFKKAG TPTMGGLMIL AGIVVSSLLW ADLSSIYVVS TLLVTLGFGA IGFYDDYLKV
TKQSDKGFSG KARLGIEFVI ASIAVFFMMQ AALSAGAAGS TFGSSVTFPF FKDLMLNLGY
FFVLFGGFVI VGAGNSVNLT DGLDGLAIVP VMIASAAFGL IAYLAGNAVF ANYLQIHFVP
GTGELAVILG AVIGAGLGFL WFNAPPAAIF MGDTGSLALG GLIGTVAVAT KHEIVMVIIG
GLFVMETLSV IIQVFWFKRT GHRVFLMAPI HHHFEKKGWT ESQVVIRFWI IAVILAMVGL
STLKLR