| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2084 |
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| Symbol | murD |
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| ID | 5322943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2141181 |
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| End bp | 2142572 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791021 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001327752 |
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| Protein GI | 150397285 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0517095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000454332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCCCGG TCACTTCATT CAAGGGTAGG AAGGTCGCAC TCTTCGGGCT GGGCGGCTCC
GGACTGGCGA CCGCCCAGGC GCTCGTTGCA GGCGGAGCCG ATGTGGTGGC TTGGGACGAC
AACCCCGACA GCGTCGCCAA GGCGGATCAG GCCGGGATCG CGACGGCCGA TCTGCGGGGC
GAGGAATGGC ATGCCTTTTC CGCCTTGGTC CTTTCGCCCG GCGTGCCGCT GACCCATCCA
AAGCCGCATT GGAGCGCCGA CCTCGCGCAT CATGCCGGCG TCGAGATCAT CGGCGATGTC
GAGCTGTTCG TGCGCGAGCG GCGCAAGCAC GCGCCTGACT GCCCTTTCAT TGCCATCACC
GGCACCAACG GCAAATCCAC GACGACGGCG CTGATCGCCC ATATCCTGCG CGCAAGTGGG
CGGGACACAC AGCTCGGCGG CAATATAGGC ACAGCGGTGC TGACGCTGGA GCCGCCGCAG
GCGGACCGCT TCTATGTCGT CGAATGCTCA TCCTACCAGA TCGACCTGGC ACCCACGCTC
GATCCCACCG CCGGGATACT CCTCAACCTC ACGCCGGATC ATCTGGATCG CCATGGTACG
ATGCAGCACT ATGCCGACAT CAAGGAGCGC CTGGTGGCGG GGAGCGGAAC GGCGATTGTC
GGTGTCGACG ACAGCCTTTC GAGTCTGATT GCCGACCGGG TGGAGCGAGC AGGTACCAAG
GTCGTGCGTA TCTCGCGCCG TCATCCGCTT GCCGAAGGTG TCTATGCCGA AGGTACGGCG
CTGATGCGTG CGACTGGCGG GGCATCGTCG CTCTTTACCG ACCTTGCCGG GATCCAGACG
CTGCGTGGCG GTCACAATGC CCAGAATGCC GCGGCCGCGA TCGCCGCGTG CCTGGCGGTC
GGCATTTCCG AAAAGGACAT AGTGGACGGC CTCAGAAGCT TTCCGGGGCT CAAGCACCGG
ATGCAGCCGG TTGCGAAGAA GGGCGAGACC ATCTTCGTCA ACGATAGCAA GGCGACCAAC
GCCGAGGCCG CAGCACCGGC GCTGTCGAGT TACGACCGTA TCTACTGGAT CGCCGGCGGT
CTGCCGAAGG AGGGCGGCAT CACCTCGTTG ACGCCATTCT TTCCGAAAAT CGTCAAAGCC
TATCTGATCG GAGAGGCGGC GCCGTCTTTC GCGGCGACCC TCGGCGAGGC AGTGCCCTAC
GAAATCTCGG GGACATTGGA AAAAGCGGTT GCGCATGCGG CATCGGACGC GGCGCGCGAT
GCCGGGGCGC CGGCGACCGT GATGCTTTCC CCGGCTTGCG CAAGCTTCGA CCAGTATAAG
AACTTCGAAC TGCGCGGAGA TGCCTTCGTC GAGCACGTGA AGGCGCTCGA GGGCGTGATC
ATGCTCATCT GA
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| Protein sequence | MIPVTSFKGR KVALFGLGGS GLATAQALVA GGADVVAWDD NPDSVAKADQ AGIATADLRG
EEWHAFSALV LSPGVPLTHP KPHWSADLAH HAGVEIIGDV ELFVRERRKH APDCPFIAIT
GTNGKSTTTA LIAHILRASG RDTQLGGNIG TAVLTLEPPQ ADRFYVVECS SYQIDLAPTL
DPTAGILLNL TPDHLDRHGT MQHYADIKER LVAGSGTAIV GVDDSLSSLI ADRVERAGTK
VVRISRRHPL AEGVYAEGTA LMRATGGASS LFTDLAGIQT LRGGHNAQNA AAAIAACLAV
GISEKDIVDG LRSFPGLKHR MQPVAKKGET IFVNDSKATN AEAAAPALSS YDRIYWIAGG
LPKEGGITSL TPFFPKIVKA YLIGEAAPSF AATLGEAVPY EISGTLEKAV AHAASDAARD
AGAPATVMLS PACASFDQYK NFELRGDAFV EHVKALEGVI MLI
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