Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2012 |
Symbol | |
ID | 5322871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2063005 |
End bp | 2063892 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790949 |
Product | phosphoserine phosphatase SerB |
Protein accession | YP_001327680 |
Protein GI | 150397213 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCTCG TTGCCACGCT TATCGCCAAT CCGTCAAATC CGGTTCTGAC GCCAGCACGC GCGGAGGCGG CAGCGGAACG CCTCGATGCA TCAGGACTCT ATTGGCTCGC GGACGGCATC GCCTGCGACA TCGTGTTGAG GGATGGCACC GATGCCGGCG AAGCACAAGC CGGGCTACGT GAGACGGTTG CCGGCGCCGC TATCGATGTC GCTGTGCAGG AGGCCGAAAG CCGTCGGAAG CGATTTCTGA TCGCCGACAT GGATTCGACC ATGATCGGGC AGGAATGCAT CGATGAACTG GCCGCGGAGG TCGGCTTGAA GGAGAAGGTC GCAGCAATCA CGTCGCGGGC CATGAACGGT GAGATCGCGT TCGAACCGGC ACTCGTCGAA AGAGTGGCAC TTCTCAAGGG CCTGCCTGTT TCGGTCGTCG AGGAGGTCAT TGCCAAGCGT ATCACATTGA CGCCCGGCGG CCGCGAACTC ATTGCCACGA TGAAGGCCAA GGGCCACTAT ACGGCGCTCG TCTCGGGTGG CTTCACCGTG TTCACCGGAC CGATAGCGGA AATGCTCGGC TTCGACGAAA GCCGCGCCAA TATTCTCCGT GACGAGGATG GCAGGCTCAC CGGCGATGTC GCTCGGCCGA TTCTGGGCAA GCAGGCAAAG ATCGACGCGC TTATCGATAT TTCGGAACGG CTCGGCATCA CGCCAGCGGA CGCCATCGCC GTCGGCGACG GCGCCAACGA TCTCGGCATG CTGCAACTTG CCGGCACCGG AGTGGCGCTA CACGCCAAGC CCGTGGTTGC CGAGCAGGCG AGGATCCGCA TCGATCACGG CGACCTCACC GCCCTGCTCT ACCTTCAGGG TTACCGGAAG ACGGACTTCG TGGCGTGA
|
Protein sequence | MALVATLIAN PSNPVLTPAR AEAAAERLDA SGLYWLADGI ACDIVLRDGT DAGEAQAGLR ETVAGAAIDV AVQEAESRRK RFLIADMDST MIGQECIDEL AAEVGLKEKV AAITSRAMNG EIAFEPALVE RVALLKGLPV SVVEEVIAKR ITLTPGGREL IATMKAKGHY TALVSGGFTV FTGPIAEMLG FDESRANILR DEDGRLTGDV ARPILGKQAK IDALIDISER LGITPADAIA VGDGANDLGM LQLAGTGVAL HAKPVVAEQA RIRIDHGDLT ALLYLQGYRK TDFVA
|
| |