Gene Smed_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2012 
Symbol 
ID5322871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2063005 
End bp2063892 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content62% 
IMG OID640790949 
Productphosphoserine phosphatase SerB 
Protein accessionYP_001327680 
Protein GI150397213 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCG TTGCCACGCT TATCGCCAAT CCGTCAAATC CGGTTCTGAC GCCAGCACGC 
GCGGAGGCGG CAGCGGAACG CCTCGATGCA TCAGGACTCT ATTGGCTCGC GGACGGCATC
GCCTGCGACA TCGTGTTGAG GGATGGCACC GATGCCGGCG AAGCACAAGC CGGGCTACGT
GAGACGGTTG CCGGCGCCGC TATCGATGTC GCTGTGCAGG AGGCCGAAAG CCGTCGGAAG
CGATTTCTGA TCGCCGACAT GGATTCGACC ATGATCGGGC AGGAATGCAT CGATGAACTG
GCCGCGGAGG TCGGCTTGAA GGAGAAGGTC GCAGCAATCA CGTCGCGGGC CATGAACGGT
GAGATCGCGT TCGAACCGGC ACTCGTCGAA AGAGTGGCAC TTCTCAAGGG CCTGCCTGTT
TCGGTCGTCG AGGAGGTCAT TGCCAAGCGT ATCACATTGA CGCCCGGCGG CCGCGAACTC
ATTGCCACGA TGAAGGCCAA GGGCCACTAT ACGGCGCTCG TCTCGGGTGG CTTCACCGTG
TTCACCGGAC CGATAGCGGA AATGCTCGGC TTCGACGAAA GCCGCGCCAA TATTCTCCGT
GACGAGGATG GCAGGCTCAC CGGCGATGTC GCTCGGCCGA TTCTGGGCAA GCAGGCAAAG
ATCGACGCGC TTATCGATAT TTCGGAACGG CTCGGCATCA CGCCAGCGGA CGCCATCGCC
GTCGGCGACG GCGCCAACGA TCTCGGCATG CTGCAACTTG CCGGCACCGG AGTGGCGCTA
CACGCCAAGC CCGTGGTTGC CGAGCAGGCG AGGATCCGCA TCGATCACGG CGACCTCACC
GCCCTGCTCT ACCTTCAGGG TTACCGGAAG ACGGACTTCG TGGCGTGA
 
Protein sequence
MALVATLIAN PSNPVLTPAR AEAAAERLDA SGLYWLADGI ACDIVLRDGT DAGEAQAGLR 
ETVAGAAIDV AVQEAESRRK RFLIADMDST MIGQECIDEL AAEVGLKEKV AAITSRAMNG
EIAFEPALVE RVALLKGLPV SVVEEVIAKR ITLTPGGREL IATMKAKGHY TALVSGGFTV
FTGPIAEMLG FDESRANILR DEDGRLTGDV ARPILGKQAK IDALIDISER LGITPADAIA
VGDGANDLGM LQLAGTGVAL HAKPVVAEQA RIRIDHGDLT ALLYLQGYRK TDFVA