Gene Smed_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2006 
Symbol 
ID5322865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2055970 
End bp2056815 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID640790943 
Productaldo/keto reductase 
Protein accessionYP_001327674 
Protein GI150397207 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATC CGATCCCGAC CATCACTTTT CCGGACGGCC GCAAGGTTCC CGTGCTCGGC 
CAAGGCACTT GGCGAATGGG CGAAAACCGT GCCGGAGCCG CCGACGAGGT CCGCAGCCTG
CAAGCGGGGC TCGATCTCGG CATGACGCTG ATCGACACGG CGGAGATGTA TGGCGACGGC
GCCGCCGAAC GCATCGTCGG AGAAGCGATC AAGGGTCGGC GGGGGGACGC CTTCCTGGTC
AGCAAGGTAC TGCCCTCCAA TGCCAGCCGG ACGGGCACGC TTGCCGCCTG CGAACGCAGC
CTGCGCAATA TCGGGACCGA TTGCCTCGAT CTATACCTTC TGCATTGGCG TGGCGGCCAT
CCGCTCACCG AGACTGTGGC CGCCTTCGAA GAGCTGAAGC AGGCTGGTAA GATCCGCGCC
TGGGGCGTCT CGAATTTTGA CGTCGACGAC ATGGAGGAGC TTGCGGCCGT ACCCGACGGC
GGCAATGTCG CGGCCAACCA GGTGCTCTAC AATCTCGCGC GCCGCGGCGT CGAATTCGAC
CTTCTGCCCT GGTGCCGCGG CCGCGGCGTT CCGATCATGG CCTATTCGCC GCTCGACGAG
GGCCGCCTGC TCAATGATGC CGACCTTATC CACATCGCCA AGGCGCATCA GGCGACGCCC
GCCCAGGTGG CGCTCGCATT TTTGAAGACG CGCTCCGGCG TCATATCGAT TCCGAAGACC
GGTTCCGCCG GACGCGCCCG CGAAAACCGC GACGCAATGG ATATCCATCT GACGGCGGAA
AATCTCGCCG AACTGGATCG TCATTTCCCG CCGCCAAAGA GGAAGACGCG GCTGGAAGTG
ATCTGA
 
Protein sequence
MHDPIPTITF PDGRKVPVLG QGTWRMGENR AGAADEVRSL QAGLDLGMTL IDTAEMYGDG 
AAERIVGEAI KGRRGDAFLV SKVLPSNASR TGTLAACERS LRNIGTDCLD LYLLHWRGGH
PLTETVAAFE ELKQAGKIRA WGVSNFDVDD MEELAAVPDG GNVAANQVLY NLARRGVEFD
LLPWCRGRGV PIMAYSPLDE GRLLNDADLI HIAKAHQATP AQVALAFLKT RSGVISIPKT
GSAGRARENR DAMDIHLTAE NLAELDRHFP PPKRKTRLEV I