Gene Smed_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1928 
Symbol 
ID5322786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1982676 
End bp1983188 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content59% 
IMG OID640790865 
Producthypothetical protein 
Protein accessionYP_001327597 
Protein GI150397130 
COG category[S] Function unknown 
COG ID[COG4333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00260784 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACACGCTCGA CATGTTCGCA ATCGAGACGA AGTCGTCGGC TATCATTTCC 
GAATGCGGAG CCTACCGTTA CCGCCTTGAG CGGCAATGGG ACGGCGAAAA GCCAAACGTC
GCCTTCCTCA TGCTGAACCC ATCCACGGCT GATGCCAGCC AAGATGATCC GACGATCCGC
CGGTGCATCG GCTTCGCGAG ATATTGGGGC TTCGGCGGCT TGATTGTTGG CAACCTCTTT
GCCCTTCGCT CCACCGCCCC GAAGGCCCTG TACGACCATC CCGACCCGAT CGGGCCCGAC
AACGATCAGC ACATTCTTGC GATTGCAAAG AGCGCCCGTA AGATCGTTTG CGCGTGGGGG
ACACACGGAG CTCTTCATGA CCGCGGTCGC CAGGTCGCCG AACGGCTCGA ATTCTTCGAC
CTCGTCGCGC TGAAAGTCAC AGCAGACGGC CAGCCAGGTC ATCCGCTGTA CCTCGCTGCC
GATATCCAAC CTAAATCGTA TTTTGCGCCA TGA
 
Protein sequence
MSTDTLDMFA IETKSSAIIS ECGAYRYRLE RQWDGEKPNV AFLMLNPSTA DASQDDPTIR 
RCIGFARYWG FGGLIVGNLF ALRSTAPKAL YDHPDPIGPD NDQHILAIAK SARKIVCAWG
THGALHDRGR QVAERLEFFD LVALKVTADG QPGHPLYLAA DIQPKSYFAP