Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1928 |
Symbol | |
ID | 5322786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 1982676 |
End bp | 1983188 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790865 |
Product | hypothetical protein |
Protein accession | YP_001327597 |
Protein GI | 150397130 |
COG category | [S] Function unknown |
COG ID | [COG4333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00260784 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG ACACGCTCGA CATGTTCGCA ATCGAGACGA AGTCGTCGGC TATCATTTCC GAATGCGGAG CCTACCGTTA CCGCCTTGAG CGGCAATGGG ACGGCGAAAA GCCAAACGTC GCCTTCCTCA TGCTGAACCC ATCCACGGCT GATGCCAGCC AAGATGATCC GACGATCCGC CGGTGCATCG GCTTCGCGAG ATATTGGGGC TTCGGCGGCT TGATTGTTGG CAACCTCTTT GCCCTTCGCT CCACCGCCCC GAAGGCCCTG TACGACCATC CCGACCCGAT CGGGCCCGAC AACGATCAGC ACATTCTTGC GATTGCAAAG AGCGCCCGTA AGATCGTTTG CGCGTGGGGG ACACACGGAG CTCTTCATGA CCGCGGTCGC CAGGTCGCCG AACGGCTCGA ATTCTTCGAC CTCGTCGCGC TGAAAGTCAC AGCAGACGGC CAGCCAGGTC ATCCGCTGTA CCTCGCTGCC GATATCCAAC CTAAATCGTA TTTTGCGCCA TGA
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Protein sequence | MSTDTLDMFA IETKSSAIIS ECGAYRYRLE RQWDGEKPNV AFLMLNPSTA DASQDDPTIR RCIGFARYWG FGGLIVGNLF ALRSTAPKAL YDHPDPIGPD NDQHILAIAK SARKIVCAWG THGALHDRGR QVAERLEFFD LVALKVTADG QPGHPLYLAA DIQPKSYFAP
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