Gene Smed_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1872 
Symbol 
ID5322730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1942785 
End bp1943909 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content61% 
IMG OID640790809 
Producthypothetical protein 
Protein accessionYP_001327541 
Protein GI150397074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.573397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAC CCTACGTAAC GGGCACGGTT TCCGTGACCG CCGGCAGCGC CGTTGTCACC 
GGCTCCGGGA CCGCCTGGCA AACGGCATTG ATCGCAGGTG GGTTGTTCGG GCTCGACAGC
AGCAACGGCA ACCCGGTCCC GATCCTCTCC GTCGACAGCA ACACGCAGCT GACGCTGGCG
AAGCCATGGC GGGGCACCAC GGCGGCCGGG CAGGGGTACT GGATCGTTCG CGATACGGCC
TACCTGCAAC AACAGACCGT CAATGCCCAG GCGCTCTCGA CCTATATCCA GCGGCTCGAC
AATGGAACGC TGGCTGCGCT AGCCGGGCTC GACCCCGCGG CGGACAAGTT CGCCTACTTC
ACCGGTGCAA ACTCGGGCGC GCTGGCGGAC ATCAAGGCGA AGGGGCGGGA CCTGCTTTCG
TCGACGGGTG TGCTCGACGC CCTCCTGAAG CTTGGGCCTG TATGGGGTGG ATCCGTGCGA
TCCCCTGCTA ACAGTGATGT CGGATTGGTC GATGGCGACC TCAACACGAT CACCATTGCC
GGCGTTTACA CACTCTCGGG GAACTGGGCC AACACCTATG CCGGAGCCGC CTCGGTAGCC
ACGACAGGCA CCCTCGTGGT TCTCCAGCGA AGCGCCAATG CCGTCTTTCA ATATTTCTAC
CGAGACAACA ACCAGGTCTT CAGAAGGAAC ACCGTCAACG GCGGCACAAG CTGGACGGAC
TGGACGATTG TCGAGCTTCC GGTTGTAGGC ACTGCCTCAA ACTCGGCAGG CTTCCCGGCT
GGCGCAATCA TCGAGCGCGG CAGCAACGCC AACGGCGAGT ACGTGCGGTT TGCGGACGGC
ACACAGATCT GTTGGGGAAC TGGAACCATT AACGTCTCGA CTACCCTCAA CAATCACTTC
GGATCCAGCT CTGGAGCCTC GGTCACCGGC AACGCGCTAA TCAGCTTCCC GGCGACGTTC
TCGAACACAA ACTACTCGGT AACGGTCTTC CCGACCTTCC GCGGCTTCAC GGTGCTTGGC
GCCTATTCGA AGAACGGTGC CAATGCCGCT GTCAGGATGG GTGTATCAGG CTCGACCGCA
AACGATGTTC CCTATGAATG GTCAGCTTTC GGAAGGTGGT TCTGA
 
Protein sequence
MTIPYVTGTV SVTAGSAVVT GSGTAWQTAL IAGGLFGLDS SNGNPVPILS VDSNTQLTLA 
KPWRGTTAAG QGYWIVRDTA YLQQQTVNAQ ALSTYIQRLD NGTLAALAGL DPAADKFAYF
TGANSGALAD IKAKGRDLLS STGVLDALLK LGPVWGGSVR SPANSDVGLV DGDLNTITIA
GVYTLSGNWA NTYAGAASVA TTGTLVVLQR SANAVFQYFY RDNNQVFRRN TVNGGTSWTD
WTIVELPVVG TASNSAGFPA GAIIERGSNA NGEYVRFADG TQICWGTGTI NVSTTLNNHF
GSSSGASVTG NALISFPATF SNTNYSVTVF PTFRGFTVLG AYSKNGANAA VRMGVSGSTA
NDVPYEWSAF GRWF