| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1863 |
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| Symbol | |
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| ID | 5322721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 1936118 |
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| End bp | 1936855 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640790800 |
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| Product | necrosis-inducing protein |
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| Protein accession | YP_001327532 |
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| Protein GI | 150397065 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00488772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.370608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAACCG CCTCTCCACT CAATGGGCGA ATGCCATTAA CCGCCTTAAT GTTCGTTTTT
GTTTGCGGAC TATCGATGCC GGCGCGCGCG GCTGAAGTCA TTGATCACGA CCAGGTGAAA
GGGTTTCCCG ACAGCACCTC GGGTCTCCTC AAGACCTTTC AGCCCTCTCT CAAAGTTATC
CGAGGCTGCG TCCCTTTCCC GGCCGTGGAT GCCGACGGCA ACGTCAGCGG CGGTCTGAAG
CCATCAGGAA TGGCGAGCGG CGGTTGCTCA CGCAGCCCTG GACAGATCTA TGTCAGAGCT
GGGGAGTATA ACGGTCAGTG TGCCGTCATG TACTCGTGGT TCTTTCCCAA GGACCAGAAC
CAGACCTGGC CCCTCAAGGG CGGGTCTCGG TATGATTGGG AGGATGTCAT CGTATGGCTG
ACGCGTTGCG ATAGCGAAGC GCAGGTTGAA GCGGTCAGCT ATTGGAGCGG TGGTCGTTAC
AACGTGACGC CACAGCCGCA CATGGATGGA ACACATCCGC TGGTCAAATA CTACCGGCCG
GAAGGCGGAA ACCAATTTTT ACTCGCGGAC ACCCGGTACC GTGGCGGCAA GCAGCCTGCA
GTCAGCTGGT CCGACCTGAC CGAGGAAGCA AGGGAAACGC TCGACAACTA TAACTTCGGC
AAAGTGGCTG TGCCATTCAA CTCTTACAAC TTCGACGCCA ATCTGGAGAC GGCCTGGCGA
CAAGGACATG GAGGCTGA
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| Protein sequence | MITASPLNGR MPLTALMFVF VCGLSMPARA AEVIDHDQVK GFPDSTSGLL KTFQPSLKVI
RGCVPFPAVD ADGNVSGGLK PSGMASGGCS RSPGQIYVRA GEYNGQCAVM YSWFFPKDQN
QTWPLKGGSR YDWEDVIVWL TRCDSEAQVE AVSYWSGGRY NVTPQPHMDG THPLVKYYRP
EGGNQFLLAD TRYRGGKQPA VSWSDLTEEA RETLDNYNFG KVAVPFNSYN FDANLETAWR
QGHGG
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