| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1788 |
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| Symbol | |
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| ID | 5322646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1871206 |
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| End bp | 1872102 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790726 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001327458 |
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| Protein GI | 150396991 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00324618 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACATGA TGATGCGCCA TGCTCTTCCG CTGCTCGAAA TGGATGTGCT CAAGACCTTC
GTCGCCATTG CCGAGACCGG CAACTTCACG ACTGCGGCGG AGACGGTCTA CCGCACGCCC
TCAGCTGTTT CCATGCAGAT CAAGAAGCTC GAGGAAATGC TCGGCTGCAC GTTGTTCCTG
CGCGACGCCC GATCTGTCTC GCTTACTCCG AAGGGCGAAC TCCTGCTCGG TTATGCCCGG
CGGCTCCTGT CGCTGAACAA TGAGACGGTG TCCCGCTTCC TGCTGCCCGA CATGAACGGT
GTTGTGCGGG TCGGTGCGCC GGAGGATGTC GGCGAACGAA TCCTGCCGGC CGTGTTGAAG
CGCTTTGCCG AGACTTATCC GAACGTCACC ATCGACGTTT CGATCGGCAT GAGCAATGCT
ATGCGCAAGC GGGTTGACGA GCATCGGTTG GATATCGCGG TGTACAACAG CCTATCGGAC
GAATCTTCGA AGGACGGCGA GATTCTGATG CAGGAGAAAC TGGTCTGGGC CGGTGCGAAA
TGCGGAAACG CACATCTGCG CGATCCTCTG CCGGTTTCCA TGTGGGAGGA CGGCTGCGTC
TGGCGCGCCG ATGCGGTCGA GAAGCTGTCG CGCGCCGGCC GGAAGTTCCG CGTCGCATTT
TTGAGTGCCT ATACGACCGG ACAGCGCGCC GCTGTCCTCG CCGGGCTCGC GATCGCACCG
CTGCCGCGCT ATCTCGTGCA GGGCGAAATG GTTCAACTCG GCGAGCGTGA CGGCCTGCCG
GATCTCGGTC ACTACGACAT TGGCCTCAAG GTCATCGAGG ATGCGCCGGC GCCGGTTCTG
GCGGTTGCGG AGCATGTTCG CGCCGCATTC GCCGAGCTGC AGATGCAGGC GGCATAG
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| Protein sequence | MNMMMRHALP LLEMDVLKTF VAIAETGNFT TAAETVYRTP SAVSMQIKKL EEMLGCTLFL
RDARSVSLTP KGELLLGYAR RLLSLNNETV SRFLLPDMNG VVRVGAPEDV GERILPAVLK
RFAETYPNVT IDVSIGMSNA MRKRVDEHRL DIAVYNSLSD ESSKDGEILM QEKLVWAGAK
CGNAHLRDPL PVSMWEDGCV WRADAVEKLS RAGRKFRVAF LSAYTTGQRA AVLAGLAIAP
LPRYLVQGEM VQLGERDGLP DLGHYDIGLK VIEDAPAPVL AVAEHVRAAF AELQMQAA
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