| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1771 |
|---|
| Symbol | |
|---|
| ID | 5322629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 1854761 |
|---|
| End bp | 1855774 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640790709 |
|---|
| Product | methionine synthase I |
|---|
| Protein accession | YP_001327441 |
|---|
| Protein GI | 150396974 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.379105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0676063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTTG CACCGCATGC TCTTGCCGAC CTCCTCGCCC AGAAGGGTGT CCTGCTTGCC
GATGGTGCTA CCGGCACATC GCTCTTCGCC ATGGGGCTCG AAGCGGGCGA AGCACCGGAG
ATCTGGAACG AGACGAAACC GGAAAACATA ACCAAGCTGC ATCAGGACTT CGTAGATGCG
GGCGCGGACA TCATTCTTAC CAATTCCTTT GGTGGCACGC GCCACCGGTT GAAGCTTCAT
CAGGCCGAAG ACCGGGTCCA TCAGCTCAAC AAGCGCGCTG CGGAAATCGC GCGCGCAGTC
GCTGACAAAG CGCCGCGAAA GGTCATTACG GCTGGCTCGG TCGGCCCGAC CGGCGAACTG
CTGATTCCGC TCGGCGCACT CTCCTATGAG GACGCCGTCG CAGCCTTTGT GGAACAGATC
GAGGGGCTGA AGGCCGGCGG TGCGGAAGTT GCCTGGATCG AAACCATGTC TTCTGCGGAC
GAAATCCGCG CAGCCGCCGA AGCGGCCGTG AAGGTCGGCC TTCCCTATGT CTACACCGGT
TCCTTCGACA CTGCCGGCAA AACGATGATG GGCCTGCACC CGAAGGACAT TCACGGCGTC
GCCGCCGACA TCGGCGAAGG CCCGGTCGCC GTCGGCGCCA ACTGCGGCGT CGGGGCGTCG
GATATCCTCT CGTCCCTCCT CGACATGACG GCCGAAAGCC CGGATGCAAC GATCGTCGTC
AAAGGCAATT GTGGAATTCC CGAGTTCCGC GGCTCCGAGA TCCACTATTC GGGCACGCCG
CCGCTGATGG CGGAATATGC GCGGTTGGCC ATGGACGCCG GCGCCAGGAT CATCGGCGGC
TGTTGCGGCA CCTCCTGCAA CCATTTGGCC GCAATGCGTC TCGCGATCGA CAATCACATC
AAAGGTGAGC GCCCGACACT CGAGACGATC GTCGAGAAAA TCGGTCCGTT GCGCAACAAG
TCTGCAAATG AAGGCCCCGC CGCCCCCGCT CGCGAGCGCC GCCGGCGCGC ATAA
|
|---|
| Protein sequence | MSVAPHALAD LLAQKGVLLA DGATGTSLFA MGLEAGEAPE IWNETKPENI TKLHQDFVDA
GADIILTNSF GGTRHRLKLH QAEDRVHQLN KRAAEIARAV ADKAPRKVIT AGSVGPTGEL
LIPLGALSYE DAVAAFVEQI EGLKAGGAEV AWIETMSSAD EIRAAAEAAV KVGLPYVYTG
SFDTAGKTMM GLHPKDIHGV AADIGEGPVA VGANCGVGAS DILSSLLDMT AESPDATIVV
KGNCGIPEFR GSEIHYSGTP PLMAEYARLA MDAGARIIGG CCGTSCNHLA AMRLAIDNHI
KGERPTLETI VEKIGPLRNK SANEGPAAPA RERRRRA
|
|---|
| |