| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1759 |
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| Symbol | cobN |
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| ID | 5322617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1838278 |
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| End bp | 1842099 |
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| Gene Length | 3822 bp |
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| Protein Length | 1273 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640790697 |
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| Product | cobaltochelatase subunit CobN |
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| Protein accession | YP_001327429 |
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| Protein GI | 150396962 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.193122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0775991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTCC TCCTAGCCCA GAAAGGTACG ATCGCCGACG GCAACGAGGC GATCGACCTC
GGGCAGAGCC CGGGCGACAT CGTGTTCCTC TCCGCGGCCG ATACGGAGCT TGCCTCGGTC
GCTGCTGCCC ACCGCCAGCG CGCGGGCGCA AGAAGCCTGC GGATCGCCAG CTTGATGAAT
CTCATGCATC CGATGTCCGT CGACACTTAT GTCGAGCGCA CGGCGAGACA TGCGAAACTG
ATCATCGTTC GGACGCTCGG CGGTGCAAGC TACTTCCGCT ATATCGTGGA GGCGCTGTAC
GCCGCCGCGG TCACCAACAA GTTCCAGATT GCTGTCTTGC CGGGTGACGA CAAGCGGGAC
CCCGGCCTCG ATCCCTTTTC GACCGTGTCA GTGGAAGACC GTCAGCACCT TTGGGCCTAT
TTCAACGAAG GCGGCGCCGA TAATGCCGCC CTTCTCCTCG ATTATGCAGA GGCACTGATC
GATGGCTGCG AGAAGCCGCA GCAGGCGCGG CCGCTGCTCA AGGCCGGTAT CTGGTGGCCC
GGCGCGGGGG TAATCGGCGT CGAGGAATGG GGGCGCCTGT CGGAACTGCG TCGGGGCGAC
AAAGATCCGG CGGACAGTCC GGAATCCGAA CCGATGGTCG CCATCTGCTT CTACCGTGCT
CTCGTGCAGA GCGGGGAGAC GAAACCGGTG GAAGCGCTGA TCGAGGCGCT TGCGGCCGAG
GGTGTGCGGG CACTTCCTGT TTTCGTCTCC AGTCTCAAGG ATCAGGTCTC GATCGGAACA
CTCGAAGCGA TCTTCGCCGA GGCTGTGCCG GATGTCGTGA TGAACGCAAC CGGCTTTGCC
GTCTCCGCTC CCGGCGCGGA TCGCCGGCCG ACCGTACTCG AAGCAAACGG CGCGCCGGTG
CTGCAGGTGA TCTTTTCCGG GTCGTCGCGG GAGGCCTGGG AAGCCTCGGC GCAAGGGTTG
ATGGCGCGCG ATCTCGGCAT GAACGTCGCC TTGCCGGAAG TCGATGGGCG CGTCCTCTCG
CGCGCCGTAT CGTTCAAGGC AGCGTCGATT TATGATCCGC TCGTCGAAGC GAACATCGTC
GGCCACGAGC CGCTCGCAGA CCGTGTCCGT TTTGCCGCGC GCCTTGCCTC GAACTGGGCT
CGCCTGCGTC GAACACAACC TCAAAGGCGC CGGGTCGCCA TCGTCATGGC CAATTATCCA
AACCGCGACG GCCGGCTCGG CAACGGTGTT GGACTCGACA CGCCAGCAGG GACAATCGAG
GTGCTGAGGG CCATGGCGAC AGAGGGTTAC GCTGTCGGCG ATGTGCCCGA AGACGGCGAC
GCCCTCATGC GTTTTCTGAT GGCCGGGCCG ACAAATGCCG CGAGCCGCGA CCGTGAAATT
CGCGAAACGA TTTCGCTGAG CCAATACAGA GACTTCTTAG GCACTCTTCC GAAAAAGATT
CATCAGGAGA TGACCGCGCG TTGGGGCGCG CCCGAGGGCG ACCCGTTCTT CCTCGACGGC
GTCTTCGCCC TGCCGCTCGC GCGCTTCGGC GAAGTGCTTG TCGGCATCCA GCCGGCGCGT
GGCTACAATA TAGATCCGAA GGAAACCTAT CACGCTCCGG ACCTTGTGCC GCCGCACGGC
TACCTTGCTT TCTATGCCTA TCTGCGCGCG GTTTTCGGCG CACATGCCAT CGTTCACATG
GGAAAACATG GCAATCTCGA ATGGCTTCCC GGAAAGGCGC TGGCGCTTTC CCAGGATTGC
TATCCCGAGG CGATTTTCGG TCCGACGCCG CATCTTTATC CCTTCATCGT CAATGATCCC
GGAGAGGGCA CGCAAGCCAA GCGGCGAACG AGTGCCGTCA TCATCGACCA TCTCACGCCA
CCTTTGACGC GGGCCGAGTC CTACGGACCG CTGAAGGACC TGGAGGCGCT GGTCGATGAG
TATTACGAGG CTGCTGGCGG CGATCCGCGC CGGCTGAGGC TGCTGAGCCG GCAGATTCTC
GACCTCGTAC GAGATATCGG GCTTGATCAC GACGCCGGCA TCGACAAGGC TGACACTGAA
AACCGGGCTC TCGAAAAGCT CGACGCCTAT CTCTGCGACC TGAAGGAAAT GCAGATCCGC
GACGGGTTGC ACGTTTTCGG CCTGGCGCCC AAGGGGCGGC TCCTGACCGA TCTCACCGTC
GCGCTCGCCC GAGTACCGCG GGGCATGGGT GAGGGTGGGG ATCAGAGCCT GCAGCGTGCG
ATTGCGGCGG ACCTGGGGTT GTATGCAGCG GCACTGCCAC GCACCCAACC CTTCGACCCG
CTGGATTGCG TCATGTCCGA TCCTTGGACC GGTACGAGGC CCGATCTCCT CGCGACCCTC
TCGGATGCGC CCTGGCGCAC CGCCGGCGAC ACCGTCGAGC GTATCGAACT GCTTGCGGCG
AAGCTCGTTT CAGGCGAAAT CGCCTGCTCG ATGGATTGGG CCAACACCCG AGCCGTACTT
GACGAGGTCG AGATGCGCCT GAAGCCCTCG ATCGAGCGTT CGGGCGAGGC GGAAATCAAG
GGTCTTCTGA CCGGTCTCGA CGGCCGGTTC GTCGCCCCCG GTCCGTCCGG TGCGCCGACG
CGCGGCCGGC CGGACGTGCT GCCGACGGGC CGCAATTTCT ATTCGGTCGA CAGCCGTTCC
GTGCCGACGC CCGCGGCCTA TGAGCTTGGC AAGAAATCGG CGGAATTGCT TATCCGCCGA
TATCTGCAGG ATCATGGCGA GTGGCCATCT TCCTTCGGAC TGACGGCCTG GGGCACTTCC
AACATGCGCA CGGGCGGCGA CGACATCGCT CAGGCTTTGG CGCTGATCGG CGCCAAGCCC
GTCTGGGACA TGGCCTCGCG GCGGGTGACC GGATACGAGA TCGTACCGCT CGCCATCCTC
GGCCGCCCCC GCGTGGACGT CACCTTGCGA ATTTCCGGCT TCTTCCGTGA TGCTTTTCCG
GAGCAGATCG CTCTCTTCGA CAAAGCGGTC CGCGCCGTCG GGGCTCTCGA CGAGGACGAT
GCCGACAATG TGATCGCCGC CCGCATGCGT GCCGAAGCGC GGCGATGGGA AGAGCGGGGC
ACCGACCCAA AAGAGGCTCA ACGCCGTGCC TCCTATCGTG TCTTTGGTTC GAAGCCCGGC
GCTTACGGCG CGGGCCTGCA AGCGCTTGTC GACGAGAAGG GCTGGCAAAC GCGCGGCGAT
CTTGCAGAGG CTTACCTCAC CTGGGGCGGC TATGCCTACG GTGCCGGCGA GGATGGAAAG
GCGGAGCGTG GCATTTTCGA GGATCGCCTG CGCTCGATAG AGGCTGTTGT CCAGAACCAG
GACAACCGCG AGCACGATCT GCTCGACAGC GACGACTATT ACCAGTTCGA GGGCGGCATG
AGCGCGGCGG CGGAGCATCT CGCCGGCCAG CGTCCGGCCA TCTACCACAA CGACCATTCG
CGCCCGGAAA AGCCCGTCAT CCGCTCGCTA GAGGAGGAGA TCGGCCGCGT CGTGCGTGGC
CGTGTCGTCA ATCCGAAATG GATCGACGGC GTGATGCGGC ACGGCTACAA GGGCGCCTTC
GAAATCGCCG CGACGGTCGA TTACATGTTC GCCTTCGCTG CGACCACAGG CGCGGTGCGC
GATCATCACT TCGAGGCCGC CTATCGAGCC TATATCGCCG ACGAGAAGGT TCTCGGGTTT
CTTCGCGAGA AGAACCCGGC CGCGCTTTCG GAAATGTCCG AGCGGCTGCT GGAGGCTATC
GATAGAGGAC TGTGGAACCC GCGCTCCAAT TCGGCGCGAT TCGAACTGAA CAGCCTTTCC
GGCCGCGCGG CTACTGACCG CCTTCTGGCC GGAAATCAAT AG
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| Protein sequence | MHLLLAQKGT IADGNEAIDL GQSPGDIVFL SAADTELASV AAAHRQRAGA RSLRIASLMN
LMHPMSVDTY VERTARHAKL IIVRTLGGAS YFRYIVEALY AAAVTNKFQI AVLPGDDKRD
PGLDPFSTVS VEDRQHLWAY FNEGGADNAA LLLDYAEALI DGCEKPQQAR PLLKAGIWWP
GAGVIGVEEW GRLSELRRGD KDPADSPESE PMVAICFYRA LVQSGETKPV EALIEALAAE
GVRALPVFVS SLKDQVSIGT LEAIFAEAVP DVVMNATGFA VSAPGADRRP TVLEANGAPV
LQVIFSGSSR EAWEASAQGL MARDLGMNVA LPEVDGRVLS RAVSFKAASI YDPLVEANIV
GHEPLADRVR FAARLASNWA RLRRTQPQRR RVAIVMANYP NRDGRLGNGV GLDTPAGTIE
VLRAMATEGY AVGDVPEDGD ALMRFLMAGP TNAASRDREI RETISLSQYR DFLGTLPKKI
HQEMTARWGA PEGDPFFLDG VFALPLARFG EVLVGIQPAR GYNIDPKETY HAPDLVPPHG
YLAFYAYLRA VFGAHAIVHM GKHGNLEWLP GKALALSQDC YPEAIFGPTP HLYPFIVNDP
GEGTQAKRRT SAVIIDHLTP PLTRAESYGP LKDLEALVDE YYEAAGGDPR RLRLLSRQIL
DLVRDIGLDH DAGIDKADTE NRALEKLDAY LCDLKEMQIR DGLHVFGLAP KGRLLTDLTV
ALARVPRGMG EGGDQSLQRA IAADLGLYAA ALPRTQPFDP LDCVMSDPWT GTRPDLLATL
SDAPWRTAGD TVERIELLAA KLVSGEIACS MDWANTRAVL DEVEMRLKPS IERSGEAEIK
GLLTGLDGRF VAPGPSGAPT RGRPDVLPTG RNFYSVDSRS VPTPAAYELG KKSAELLIRR
YLQDHGEWPS SFGLTAWGTS NMRTGGDDIA QALALIGAKP VWDMASRRVT GYEIVPLAIL
GRPRVDVTLR ISGFFRDAFP EQIALFDKAV RAVGALDEDD ADNVIAARMR AEARRWEERG
TDPKEAQRRA SYRVFGSKPG AYGAGLQALV DEKGWQTRGD LAEAYLTWGG YAYGAGEDGK
AERGIFEDRL RSIEAVVQNQ DNREHDLLDS DDYYQFEGGM SAAAEHLAGQ RPAIYHNDHS
RPEKPVIRSL EEEIGRVVRG RVVNPKWIDG VMRHGYKGAF EIAATVDYMF AFAATTGAVR
DHHFEAAYRA YIADEKVLGF LREKNPAALS EMSERLLEAI DRGLWNPRSN SARFELNSLS
GRAATDRLLA GNQ
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