Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1557 |
Symbol | |
ID | 5322415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1649680 |
End bp | 1650513 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640790502 |
Product | metallophosphoesterase |
Protein accession | YP_001327234 |
Protein GI | 150396767 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.118402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0847897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACGG TATCGGCACC CCAACAGAAT TCCGTTCGGA AACTGCGGAC GCTCTTCATT TCCGATGTTC ATCTGGGCTC GAAGGCGGCC AAGACGGATT TCCTGATCGA TTTTCTGCGC CACCACGAGG CGGACACGAT CATCCTCGTC GGCGACATCG TCGACGGCTG GCGCCTGAAG CGCAGCTGGT ATTGGCCGCA ATCCTGCAAC GACGTGGTCC AGAAGCTTCT GCGTAAGGCA CGGAAGGGTA CGCGGATTGT CTATATCCCG GGAAACCATG ACGAGTTCCT CCGCGACTTT CCGGGCATTC ATTTCGGCGG TATCGAAGTG GCGCAGCGTT ACCTCCACCG GGGCGCGGAC GGCCGGACCT ATCTCGTGCT GCACGGCGAT GAGTTCGATG TCGTCGTGCG CAATGCACGT GTCCTCGCCT ATCTGGGTGA CTGGGCCTAT GACATGGCGA TCGCCATCAA TATCGGCCTT GCCGCCGTAC GTCGTCGTCT CGACATGCCT TACTGGTCTT TCTCCTCCTG GGCGAAGCTG CAAGTCAAAC ATGCGGTAAA CTTCATCGGA GAGTTCCAGA GAGTCGTGGC TGAGGAGGCC CGTCGCCACG ACGCCCAAGG CGTCATCTGC GGCCACATCC ATCATGCAAT CATCGAAGAC ATCGGCGACA TCAGGTACAT CAACACCGGG GATTGGGTGG AGAGCTGCAC GGCGATCGCC GAGCATCATG ACGGCACCAT GGAGCTTATC ACGTGGCACC AGACGCGTGG AGACACTACC GCGGACCAGC GAGCCTCCGA GGCCGTTACG CGGCTCGCAC CGCAAGCCGC ATAA
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Protein sequence | MATVSAPQQN SVRKLRTLFI SDVHLGSKAA KTDFLIDFLR HHEADTIILV GDIVDGWRLK RSWYWPQSCN DVVQKLLRKA RKGTRIVYIP GNHDEFLRDF PGIHFGGIEV AQRYLHRGAD GRTYLVLHGD EFDVVVRNAR VLAYLGDWAY DMAIAINIGL AAVRRRLDMP YWSFSSWAKL QVKHAVNFIG EFQRVVAEEA RRHDAQGVIC GHIHHAIIED IGDIRYINTG DWVESCTAIA EHHDGTMELI TWHQTRGDTT ADQRASEAVT RLAPQAA
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