Gene Smed_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1557 
Symbol 
ID5322415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1649680 
End bp1650513 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID640790502 
Productmetallophosphoesterase 
Protein accessionYP_001327234 
Protein GI150396767 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.118402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0847897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGG TATCGGCACC CCAACAGAAT TCCGTTCGGA AACTGCGGAC GCTCTTCATT 
TCCGATGTTC ATCTGGGCTC GAAGGCGGCC AAGACGGATT TCCTGATCGA TTTTCTGCGC
CACCACGAGG CGGACACGAT CATCCTCGTC GGCGACATCG TCGACGGCTG GCGCCTGAAG
CGCAGCTGGT ATTGGCCGCA ATCCTGCAAC GACGTGGTCC AGAAGCTTCT GCGTAAGGCA
CGGAAGGGTA CGCGGATTGT CTATATCCCG GGAAACCATG ACGAGTTCCT CCGCGACTTT
CCGGGCATTC ATTTCGGCGG TATCGAAGTG GCGCAGCGTT ACCTCCACCG GGGCGCGGAC
GGCCGGACCT ATCTCGTGCT GCACGGCGAT GAGTTCGATG TCGTCGTGCG CAATGCACGT
GTCCTCGCCT ATCTGGGTGA CTGGGCCTAT GACATGGCGA TCGCCATCAA TATCGGCCTT
GCCGCCGTAC GTCGTCGTCT CGACATGCCT TACTGGTCTT TCTCCTCCTG GGCGAAGCTG
CAAGTCAAAC ATGCGGTAAA CTTCATCGGA GAGTTCCAGA GAGTCGTGGC TGAGGAGGCC
CGTCGCCACG ACGCCCAAGG CGTCATCTGC GGCCACATCC ATCATGCAAT CATCGAAGAC
ATCGGCGACA TCAGGTACAT CAACACCGGG GATTGGGTGG AGAGCTGCAC GGCGATCGCC
GAGCATCATG ACGGCACCAT GGAGCTTATC ACGTGGCACC AGACGCGTGG AGACACTACC
GCGGACCAGC GAGCCTCCGA GGCCGTTACG CGGCTCGCAC CGCAAGCCGC ATAA
 
Protein sequence
MATVSAPQQN SVRKLRTLFI SDVHLGSKAA KTDFLIDFLR HHEADTIILV GDIVDGWRLK 
RSWYWPQSCN DVVQKLLRKA RKGTRIVYIP GNHDEFLRDF PGIHFGGIEV AQRYLHRGAD
GRTYLVLHGD EFDVVVRNAR VLAYLGDWAY DMAIAINIGL AAVRRRLDMP YWSFSSWAKL
QVKHAVNFIG EFQRVVAEEA RRHDAQGVIC GHIHHAIIED IGDIRYINTG DWVESCTAIA
EHHDGTMELI TWHQTRGDTT ADQRASEAVT RLAPQAA