| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1554 |
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| Symbol | |
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| ID | 5322412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1646059 |
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| End bp | 1647198 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790499 |
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| Product | hypothetical protein |
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| Protein accession | YP_001327231 |
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| Protein GI | 150396764 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.126304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCCTG CCCAAACAGA GACCGCTGCC GACGTCGTCG TCGATGAGGG CGCCGCCGGA
AACGGTCGGC GTTATGTGTT CAGCGGCGAC TGGAGGCATG AGACGGCCGA GGCGATGAGT
GCCAAGCTGA AGCGGCTTGG AAAACCGGCC GGCGGGCAGA GCGAGTTCGA TTTCTCCGGC
ATCACGGCAA TGGATACGGC TGGTGCGTGG ATCATTCGTC GATTCATGAA CGGGACCGCC
GACGAGGTTC GTTTCGCAGG CAGCGACCGG TATGCCGAAC TGATCCTCGC ACTGCCGAAG
CAATTGCGCA GCCCGGAAGG GGAGACGGCA CGAGCACCAC TCTTCCAGCG GCTGTTTGCG
CCTGTAGGTG AGCTGACGGT TTCCATATGG ACCGACACCG TCGCGGCCAT GTACATTCTG
GGATCAGCGG TTCGCGGCGC TCAGATGAAG CTTGGGCGCC ATGCGGGCGT TTCACCCGCT
GCGATCGTCC ATCAGATCGA CCGGATGGGC GTGATGGCGA CGCCGATCAT CACCCTGATG
TCCTTCCTGA TCGGTGCCAT CATCGCGCAG CAGGGCGCAT TCCAGCTCCG CTCCTTCGGC
GCCGAAATCT TCGTCGTCGA CCTCGTCGGC ATCCTGCAAC TGCGCGAGAT CGGCGTGTTG
CTTACAGCGA TCATGATCGC CGGGCGATCG GGAAGTGCGA TTACCGCCGA GATAGGCTCG
ATGAAGATGC GCGAAGAGGT CGACGCGCTC AAAGTCATGG GCTTGAGCCC GATCGGCGTT
CTCGTCTTTC CGCGCCTCGT GGCCCTGACG ATCGTCCTGC CGCTCCTGAC GATCATCGCG
AACTTCGCCG CCCTTGCCGG CGCCGCCATG GTGGCCTGGG CCTATTCCGG CATCACGATT
CCGACTTTCC TGGCGCGTTT GCAGGAGGCG GTCGATTTCT CTTCCGTCGC GGCCGGCATG
ATCAAGGCAC CCTTCATGGC GCTCATCATC GGCGTCGTTG CCGCGGTCGA AGGATTGAAG
GTCGGCGGCA GTGCCGAGTC GCTTGGGCGG CGGGTGACCT CGTCCGTCGT CAAGTCGATA
TTCGTCGTGA TCCTGATCGA CGGACTGTTC GCCATATTCT ACGCGGCAAT CGATTTCTGA
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| Protein sequence | MTPAQTETAA DVVVDEGAAG NGRRYVFSGD WRHETAEAMS AKLKRLGKPA GGQSEFDFSG
ITAMDTAGAW IIRRFMNGTA DEVRFAGSDR YAELILALPK QLRSPEGETA RAPLFQRLFA
PVGELTVSIW TDTVAAMYIL GSAVRGAQMK LGRHAGVSPA AIVHQIDRMG VMATPIITLM
SFLIGAIIAQ QGAFQLRSFG AEIFVVDLVG ILQLREIGVL LTAIMIAGRS GSAITAEIGS
MKMREEVDAL KVMGLSPIGV LVFPRLVALT IVLPLLTIIA NFAALAGAAM VAWAYSGITI
PTFLARLQEA VDFSSVAAGM IKAPFMALII GVVAAVEGLK VGGSAESLGR RVTSSVVKSI
FVVILIDGLF AIFYAAIDF
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