Gene Smed_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1533 
Symbol 
ID5322391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1619889 
End bp1620260 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content60% 
IMG OID640790478 
Productdihydroneopterin aldolase 
Protein accessionYP_001327210 
Protein GI150396743 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.42318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CCTACACGAT CACCCTGAAG AACTGCGCGT TCTTTGCCCG TCACGGCGTG 
CTCGACGAAG AGGAATTTCT CGGGCAGCGC TTCTTCGTCG ATGCGGAACT CGAAGTCGAG
CAGGGCACGG CGCTGGTCGA GGACTGTATC GACGACACCG TGCATTACGG CATCGCCTTC
GCCGAGATCG AGAGAATCGT GACCGGACGA AGACGTTACC TGATAGAGGC GTTGGCGCTC
GAGGTCGCCA AGACGCTTTG CGCCCGCTTC CGCCAGGTTC GCAGGGCAAA AGTCTCTATC
CGCAAGCCGA ACGCGCCGGT CCCGGGCATT CTCGATTACG TGGAAGTTAC GGTCGAGCAT
GTCGCGCAAT AG
 
Protein sequence
MTATYTITLK NCAFFARHGV LDEEEFLGQR FFVDAELEVE QGTALVEDCI DDTVHYGIAF 
AEIERIVTGR RRYLIEALAL EVAKTLCARF RQVRRAKVSI RKPNAPVPGI LDYVEVTVEH
VAQ