Gene Smed_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1516 
Symbol 
ID5322374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1597976 
End bp1598791 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID640790463 
Productglutamate racemase 
Protein accessionYP_001327195 
Protein GI150396728 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAAGA CTGAGCTGAA GCCCATCCTC GTCTTTGACA GCGGGATCGG TGGCCTGACT 
GTGCTGCGCG AGGCGCGCGT TCTGATGCCG GAGCGCCACT TTATCTATGT CGCCGACGAT
GCCGGGTTTC CCTATGGCGG CTGGGAGGAG GGCGCCTTGA AGGAGCGCGT GATCGCGCTT
TTCGGTCGGT TGCTCGCCGA GCACGATCCG GAAATCTGCA TCATCGCGTG CAATACGGCA
TTCACCCTCG TCGGGGCGGA CCTGCGCATC GTCTATCCGC AAATGACCTT CGTCGGCACG
GTGCCGGCTA TCAAGCCTGC GGCCGAGCGT ACGCGTTCGG GCCTCGTTTC GGTGCTCGCG
ACACCGGGCA CAGTGAAGCG TGCCTACACA CGCGATCTCA TCCAGTCCTT CGCTTCGCAA
TGCCATGTCA GGCTGGTCGG GTCGGAGAAC CTTGCACGCA TGGCTGAGGC CTATATCCGG
GGTGAAGCAT TGACCGATGA TGCGGTTCGC GCCGAGATCG CGCCTTGCTT TGTCGAGGTG
GATGGAAAGA GAACCGATAT CGTTGTGCTC GCCTGCACGC ACTATCCTTT CGTGGCCAAT
GTTTTCCGTC GACTCGCGCC CTGGCCGGTC GACTGGCTGG ATCCGGCCGA GGCGATTGCG
AGGCGAGCGC GCTCGCTGGT GCCGCTTCCG AACGGATTCG AGCCATTGAA TGGCGAGGAT
CCGGCGATCT TCACGTCCGG CAAGCCCGAT TTCGCCACGC GCCGGCTGAT GCAGGGTTTT
GGCCTGAAAG TCGCAGCCGT TGGTTCTCTC GGCTAA
 
Protein sequence
MTKTELKPIL VFDSGIGGLT VLREARVLMP ERHFIYVADD AGFPYGGWEE GALKERVIAL 
FGRLLAEHDP EICIIACNTA FTLVGADLRI VYPQMTFVGT VPAIKPAAER TRSGLVSVLA
TPGTVKRAYT RDLIQSFASQ CHVRLVGSEN LARMAEAYIR GEALTDDAVR AEIAPCFVEV
DGKRTDIVVL ACTHYPFVAN VFRRLAPWPV DWLDPAEAIA RRARSLVPLP NGFEPLNGED
PAIFTSGKPD FATRRLMQGF GLKVAAVGSL G