Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1516 |
Symbol | |
ID | 5322374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1597976 |
End bp | 1598791 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790463 |
Product | glutamate racemase |
Protein accession | YP_001327195 |
Protein GI | 150396728 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAAAGA CTGAGCTGAA GCCCATCCTC GTCTTTGACA GCGGGATCGG TGGCCTGACT GTGCTGCGCG AGGCGCGCGT TCTGATGCCG GAGCGCCACT TTATCTATGT CGCCGACGAT GCCGGGTTTC CCTATGGCGG CTGGGAGGAG GGCGCCTTGA AGGAGCGCGT GATCGCGCTT TTCGGTCGGT TGCTCGCCGA GCACGATCCG GAAATCTGCA TCATCGCGTG CAATACGGCA TTCACCCTCG TCGGGGCGGA CCTGCGCATC GTCTATCCGC AAATGACCTT CGTCGGCACG GTGCCGGCTA TCAAGCCTGC GGCCGAGCGT ACGCGTTCGG GCCTCGTTTC GGTGCTCGCG ACACCGGGCA CAGTGAAGCG TGCCTACACA CGCGATCTCA TCCAGTCCTT CGCTTCGCAA TGCCATGTCA GGCTGGTCGG GTCGGAGAAC CTTGCACGCA TGGCTGAGGC CTATATCCGG GGTGAAGCAT TGACCGATGA TGCGGTTCGC GCCGAGATCG CGCCTTGCTT TGTCGAGGTG GATGGAAAGA GAACCGATAT CGTTGTGCTC GCCTGCACGC ACTATCCTTT CGTGGCCAAT GTTTTCCGTC GACTCGCGCC CTGGCCGGTC GACTGGCTGG ATCCGGCCGA GGCGATTGCG AGGCGAGCGC GCTCGCTGGT GCCGCTTCCG AACGGATTCG AGCCATTGAA TGGCGAGGAT CCGGCGATCT TCACGTCCGG CAAGCCCGAT TTCGCCACGC GCCGGCTGAT GCAGGGTTTT GGCCTGAAAG TCGCAGCCGT TGGTTCTCTC GGCTAA
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Protein sequence | MTKTELKPIL VFDSGIGGLT VLREARVLMP ERHFIYVADD AGFPYGGWEE GALKERVIAL FGRLLAEHDP EICIIACNTA FTLVGADLRI VYPQMTFVGT VPAIKPAAER TRSGLVSVLA TPGTVKRAYT RDLIQSFASQ CHVRLVGSEN LARMAEAYIR GEALTDDAVR AEIAPCFVEV DGKRTDIVVL ACTHYPFVAN VFRRLAPWPV DWLDPAEAIA RRARSLVPLP NGFEPLNGED PAIFTSGKPD FATRRLMQGF GLKVAAVGSL G
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