Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1467 |
Symbol | |
ID | 5322325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1549539 |
End bp | 1550294 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640790415 |
Product | FeS assembly ATPase SufC |
Protein accession | YP_001327147 |
Protein GI | 150396680 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0406739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0473468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGAAA TCAAGAACCT GCACGCACGT ATTGCCGAGG ACGGCACCGA GATCATCCGC GGACTGAACC TGACGGTAAA GGCCGGCGAG GTCGCGGCCA TCATGGGGCC GAACGGCTCC GGCAAATCGA CGCTCTCCTA TATTCTCTCC GGACGCGAAG ATTACGAAGT GACCGAAGGC GACATCCTTT ATAACGGCGA AAGCATTCTG GAGCTCGACG CTTCCGAGCG AGCCGCAAAG GGCATCTTCC TGGCGTTCCA GTACCCGGTG GAGATCCCGG GCGTCGCGAC CATGCAGTTC CTGAAGGTGG CGATGAACGA ACAGCGCAAG TATCGCGGCG AAGACGAATT GACCACGCCG GAATTCATGC GTCGCGTCAA GGAAGCCGCC GCCGAGCTGA AGATCGCGCC TGAAATGCTG CGCCGTCCGC TCAATGTCGG TTTCTCCGGC GGTGAAAAGA AGCGCGCGGA AATTCTGCAG ATGGCTCTGC TCGAGCCGAA GCTCTGCGTT CTCGACGAAA CCGATTCCGG TCTCGACATC GACGCGCTGA AGATCGTTGC CGATGGAGTC AATGCCCTGC GTTCGCCCGA TCGTGCGGTC GTGGTCATCA CGCACTATCA GCGTCTTCTC AACTACATCG TTCCGGATAC CGTCCACGTC CTCTACAAAG GGCAGGTCAT CAAGTCCGGT GACAAGACGC TGGCGCACGA ACTCGAGGCT AACGGCTACG CTGAAATCAT CGAGGCGGCG GCCTGA
|
Protein sequence | MLEIKNLHAR IAEDGTEIIR GLNLTVKAGE VAAIMGPNGS GKSTLSYILS GREDYEVTEG DILYNGESIL ELDASERAAK GIFLAFQYPV EIPGVATMQF LKVAMNEQRK YRGEDELTTP EFMRRVKEAA AELKIAPEML RRPLNVGFSG GEKKRAEILQ MALLEPKLCV LDETDSGLDI DALKIVADGV NALRSPDRAV VVITHYQRLL NYIVPDTVHV LYKGQVIKSG DKTLAHELEA NGYAEIIEAA A
|
| |