| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1437 |
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| Symbol | |
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| ID | 5322289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 1517409 |
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| End bp | 1518161 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640790380 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001327118 |
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| Protein GI | 150396651 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.46093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000100027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAGCGTGA AATCCGTCCT CATAACTGGC GGCGCCTCCG GGATCGGCTT CGAAATAGCG
ACGCTTCTGA ACCGGCGTGG CTGGAAGGTC TATCTTGCCG ATCGCAATGC CGGTGCATTG
GCAGATGCCT GCAGCGTCAT CTCGCTCGAT CCCGCCCAGG CGCTCGCCTG CAGCGTAACG
GATGAAGAGC AGGTGCGATC GGCCATTAAG GCAGCCGCGT CGTCCGCGCC GCTCGGAGCG
ATCATCAATT CGGCCGGCAT CGCAATGGAC AGGCCGGCGG TCGACACCAG CGTCGATGAT
TTCCGCCGCA TCCTCGACGT CAACCTGACC GGCACCTTCA TCGTATGCCG TGAAGCCGCA
CGTCACTGGC TGGCAATAGC CGCCCCCGGT GCGATCGTCA ATATTTCCTC CGTGTCGGGC
CTCGTCGGCA ACAAGGGGCG GGCGGCTTAC GGCGCCTCGA AAGGGGCCGT CAATCTGCTC
ACTTACATAC TTGCGACCGA GCTTGGACAG GATGGAATTC GTGTCAATGC CATCGCGCCG
GGCGCCATCG ATACGCCTCT GTCGCGGGCC GTCCATACGG AAGACGTGCG CGCACAATGG
CACGAGCGCA TTCCGCAGCG TCGCTATGGA ACATCGCGCG AAGTCGCGCA AAGCGCAGCG
TTCCTGATCT CGGAAGAAGC CAGTTATATC AACGGCCAGG TTCTTGCGGT CGATGGTGGT
TTCGCTCATG CAGGCCTGGT TCTGAAAGGA TGA
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| Protein sequence | MSVKSVLITG GASGIGFEIA TLLNRRGWKV YLADRNAGAL ADACSVISLD PAQALACSVT
DEEQVRSAIK AAASSAPLGA IINSAGIAMD RPAVDTSVDD FRRILDVNLT GTFIVCREAA
RHWLAIAAPG AIVNISSVSG LVGNKGRAAY GASKGAVNLL TYILATELGQ DGIRVNAIAP
GAIDTPLSRA VHTEDVRAQW HERIPQRRYG TSREVAQSAA FLISEEASYI NGQVLAVDGG
FAHAGLVLKG
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