Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1419 |
Symbol | |
ID | 5322270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1501266 |
End bp | 1502243 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640790361 |
Product | alcohol dehydrogenase |
Protein accession | YP_001327100 |
Protein GI | 150396633 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.173478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0573079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGG CAATCGTCGT TCGCGAACTC GGCGGACCGG ACGTTCTGAA AATGGAGGGC GTGACTCTTG CGGCACCCGG ACCTGGCGAA GTGCAGATCC GGCAAGTCGC GATCGGCCTC AATTTCATCG ATGTCTATTT CCGCACTGGT CTCTACAAGT CGGCGACCGG GCTCCCCTTC ATCCCCGGCA AGGAAGGCGC CGGCATAGTC ACCGCCGTCG GCGACGGGGT CACCATGTTT TCGGTCGGCG ACCGCGTCGC CTATGCGTCG GCAGATGGGG CCTATGCGAG CGAACGGAAC GTTGACGCGT CGCAACTACT GAAAGTGCCC GATGGGATCA GCCTGGAGAC GGCGGCTGCG ATGATGCTCA AGGGCATGAC CGCGCAATAC CTTCTGAACC AGACCTTCAA AGTCGGCCCG GACACGACCT TGCTCTTTCA CGCTGCGGCC GGCGGCGTCG GGCTCATTGC GGGGCAATGG GCAAAGGCAC TCGGGGCGAC GGTGATCGGA ACGGCCGGAT CACAGGAGAA GATCGACCTG GCGCTTGCCC ATGGCTACGA CCATGTCATC AACTACCGCA CCGACGATTT CGTTACGCGC GTGAAGGAGC TGACCGGAGG ACGCGGCGTC GACGTCGTCT ACGATTCGGT GGGTCGTGAC ACTTACCCTG CCTCGCTCGA CTGTCTGAAG CCGCGCGGTC TCTGGGCCAG TTTCGGCAAC TCTTCCGGCC CGGTGGATGC CTTCAACATC GGCATCCTGG CGCAGAAGGG AGCGCTCTAT GCGACCCGCC CGACGCTTTT CACCTATGTC GCGACCCGGC CCGCCCTGGA GGCATGTGCA AATTCCCTGT TTGATGTTGT GCAAAGCAAC AAAGTGCGTA TCAATATCAA TCAGACCTAT CCGCTTGCCG AAGCCGGTCG GGCGCATACG GATCTCGAAA CAAGAAAAAC AAGTGGAACG ACATTGCTGA TTCCCTGA
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Protein sequence | MTQAIVVREL GGPDVLKMEG VTLAAPGPGE VQIRQVAIGL NFIDVYFRTG LYKSATGLPF IPGKEGAGIV TAVGDGVTMF SVGDRVAYAS ADGAYASERN VDASQLLKVP DGISLETAAA MMLKGMTAQY LLNQTFKVGP DTTLLFHAAA GGVGLIAGQW AKALGATVIG TAGSQEKIDL ALAHGYDHVI NYRTDDFVTR VKELTGGRGV DVVYDSVGRD TYPASLDCLK PRGLWASFGN SSGPVDAFNI GILAQKGALY ATRPTLFTYV ATRPALEACA NSLFDVVQSN KVRININQTY PLAEAGRAHT DLETRKTSGT TLLIP
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