Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1406 |
Symbol | |
ID | 5322257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 1485961 |
End bp | 1487607 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640790348 |
Product | sodium-dependent inorganic phosphate (Pi) transporter |
Protein accession | YP_001327087 |
Protein GI | 150396620 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1283] Na+/phosphate symporter |
TIGRFAM ID | [TIGR00704] Na/Pi-cotransporter [TIGR01013] Phosphate:Na+ Symporter (PNaS) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.677902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.933566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTCCA CCATCGTGAT GGTCAATCTC TTCGGCGCAG TCGCGCTGTT GCTGTTCGGC CTGTCGCTCG TCAAGGAAGG GGTCACGCGT GCGTTCGGAG CGCGGCTTCG ATCAGGCCTT GCGCGCGGCA CGGACGGTCC CTTACGGGCT TTTGCGACGG GGCTCGTCGC AACCCTCGGC CTGCAGAGTT CGACGGCGAC GGCCCTCATG ACGGCCTCTT TCGTGGAGAA GGGGCTGATC CGCTCGCAGA TGGCGCAGAT CGTGTTGCTC GGCGCCAATG TCGGCACGGC GATGACAGCG TGGATCGTCG CCCTCGGCAT CGGCTGGCTA TCGCCGCTGC TCATCCTCGC GGGCGTTGCG ACACACCGGC TGAGCCGGTC GAGCGCCCGC CAGGGCGCGG GCTACGCGCT TGTGGGCATT GGCGTGATGC TTCTTTCGCT CGAGTTGCTC GGCGCCGCGA CCGAGCCGAT GCGCCAGTCC CAGGCTCTGG CAGCGTTTCT CGGCATGCTC GATAGCGCGT TGCCCGTGGC GATGATCATA TCGGCCGGTC TCGCATTTGC GTCATCCTCC AGTCTTGCCG TCGTAATGCT GGTGCTGTCG CTTTCCTCTG CCGGGGTGCT TTCACCCGGA CTGACCGTCG CTCTGGTGCT CGGGGCCAAT CTCGGGGGGG CGATCCCGCC GGTTATCACC ACGCTCGGTT CGGCGCCTGC CGCTCGACGA GTCACGCTCG GCAATCTCGT GGTGCGCGGA ATCGGCTGCC TGGTCGCCCT TCCGGCCGTT AGCGTCAGTG CCGATTTTCT GCAGAGTCTG CCGCTGCCGC GACAGAACCT GCCCGTCGAC ATTCACCTGC TTTTCAATCT CCTTTTGGCC ATCGTCGCCT GGCCATTCGC CGGCTTGCTC GCCCGCACCA TGAATCGGTT CGTCCCGGAC GACGAAGCGG GGGAGTCCGG GCCGCACTTT CTCGACGAAG CGACGCTCGA TACGCCGGTG ATGGCCCTTT CCGGCGCGAC GCGAGAGGTC CTGAGAGTGG GCGATCTGAT CGAGGTCATG CTGATGCGTG CCTCCGAGGC ATTCAGCAGG AATGACGTCA ACGATCTCGG CGACATTGAG AAATACGAAC GGCAGGTCGA CCTGTTGCAG CAGGAAGTGA AAATCTTCCT TTCGCGGCTG GGGCGCGATG GTCTCAATGA AGAGGATGGC CGCCGTTCGA TCGTGATCAT CGACTATGCC ATCAACCTGG AGCACATGGG CGACATCATC GAAAAAGGCC TTTGCGAGCA GATCGCCAAA AAGGTGAGGG GGGGGCTGCG ATTCTCCGAG GAAGGCTATC AGGAGCTGAA GGGCCTTTTC GATCTCACCA TCGATAATCT GCGCATCGCC CAGACCATAT TCGTCACGCG CAATGCCGAC CTTGCGCGCC ATCTCATCGA GGTAAAGGTA AACGTGCGTC ATATGGAGAA GCGCTCGGCC GAGCGGCATC TGGAGCGGTT GCGCGGCGGT CTTCTCGAAA GTCTTCAGAC CAGTTCGCTG CACCTCGACA TGCTGCGTGA CCTGAAGCGC ATCAACGCGC ATATCGCATC CGTCGCCTAT CCCATCCTCG AGGAAAGCGG CCTTCTGACG GAAAGCCGGC TGCGGCCGCC GGGTTGA
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Protein sequence | MQSTIVMVNL FGAVALLLFG LSLVKEGVTR AFGARLRSGL ARGTDGPLRA FATGLVATLG LQSSTATALM TASFVEKGLI RSQMAQIVLL GANVGTAMTA WIVALGIGWL SPLLILAGVA THRLSRSSAR QGAGYALVGI GVMLLSLELL GAATEPMRQS QALAAFLGML DSALPVAMII SAGLAFASSS SLAVVMLVLS LSSAGVLSPG LTVALVLGAN LGGAIPPVIT TLGSAPAARR VTLGNLVVRG IGCLVALPAV SVSADFLQSL PLPRQNLPVD IHLLFNLLLA IVAWPFAGLL ARTMNRFVPD DEAGESGPHF LDEATLDTPV MALSGATREV LRVGDLIEVM LMRASEAFSR NDVNDLGDIE KYERQVDLLQ QEVKIFLSRL GRDGLNEEDG RRSIVIIDYA INLEHMGDII EKGLCEQIAK KVRGGLRFSE EGYQELKGLF DLTIDNLRIA QTIFVTRNAD LARHLIEVKV NVRHMEKRSA ERHLERLRGG LLESLQTSSL HLDMLRDLKR INAHIASVAY PILEESGLLT ESRLRPPG
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