Gene Smed_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1398 
Symbol 
ID5322249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1474445 
End bp1475110 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content61% 
IMG OID640790340 
ProductDSBA oxidoreductase 
Protein accessionYP_001327079 
Protein GI150396612 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.928742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG TCAATATCGA TATCGTCTCG GACGTCGTCT GCCCGTGGTG CTATCTCGGC 
AAGAATCGCC TGGCACAGGC GATCGCCAAT GTCTCCGGCG AGATCAACGT TGCAGTCCAG
TGGCGTCCTT ACCAGCTCAA TCCCGACCTG CCGCCGGAGG GCGTCGACCA TAAACAGCAC
CTGGCGGCAA AGCTCGGCGG TCAGGCCGCC GTCGACGACG CGCACCGGAT GCTCGAAAAT
CTCGGCATGG AAGACGGCGT CGCGTTCAAT TTCGATGCGG TCAAAGTCAG CCCGAATACG
CTCGATGCAC ATCGGCTGAT CCGTTGGGCA GCGACCAGCG GCGAAGCGGC GCAGGCTGAG
CTGGTAAACC TGCTTTTCAA GGCATATTTC GAAGAAGGCC GCAATGTCGG CGAGCACACC
GTCCTTCTCG ACATTGCCGA GCAGGGTGGC CTCGAAAGGC CGGTGATCGC CGCTCTCCTT
GCTTCAGACG CGGATAAGCA AGCGGTGAAG CAGGAAATCG ATATGGCGCG GGAAATCGGC
GTAACCGGCG TCCCCTGCTT CATCATCGAG CAGCAATACG CGGTCATGGG TGCGCAGTCG
GTCGAGGTGC TGTCCAGCGC TTTGCGCGAG ATCGCACAGA TGAAAGCCGA GCACCCCGCG
CACTGA
 
Protein sequence
METVNIDIVS DVVCPWCYLG KNRLAQAIAN VSGEINVAVQ WRPYQLNPDL PPEGVDHKQH 
LAAKLGGQAA VDDAHRMLEN LGMEDGVAFN FDAVKVSPNT LDAHRLIRWA ATSGEAAQAE
LVNLLFKAYF EEGRNVGEHT VLLDIAEQGG LERPVIAALL ASDADKQAVK QEIDMAREIG
VTGVPCFIIE QQYAVMGAQS VEVLSSALRE IAQMKAEHPA H