Gene Smed_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1282 
Symbol 
ID5322129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1377460 
End bp1377774 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content59% 
IMG OID640790223 
Productchaperonin Cpn10 
Protein accessionYP_001326967 
Protein GI150396500 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0543961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.509292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCC GACCGCTTCA TGATCGTATT CTCGTCCGAC GCGTCGAGTC CGAAGAAAAG 
ACCAAAGGCG GCATCATCAT TCCCGACACT GCCAAGGAGA AACCCCAGGA GGGCGAAGTC
ATCGCTGTGG GTCCTGGAGC GCGCAACGAG CAGGGCCAGG TCCAGCCGCT CGATGTCAAG
GCTGGTGATC GCATTCTGTT CGGCAAATGG TCCGGCACGG AGATCAAGAT CCACGGCGAG
GACCTGCTGA TCATGAAGGA AAGCGATGTC ATGGGTATCA TCGAGGCGCA GCCTGCCGAG
CAGATCGCCG CCTGA
 
Protein sequence
MAFRPLHDRI LVRRVESEEK TKGGIIIPDT AKEKPQEGEV IAVGPGARNE QGQVQPLDVK 
AGDRILFGKW SGTEIKIHGE DLLIMKESDV MGIIEAQPAE QIAA